Gene : Glyma.13G238100 G. max Wm82.a2.v1
Defline:  (1 of 75) PF05678 - VQ motif (VQ) Genomic Order:  2381
Name:  ? Glyma.13G238100 Secondary Identifier:  ? PAC:30502863
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G238100 0.5kb upstream 0.5kb upstream 5192 true Chr13: 34835450-34840641 Glycine max
Glyma.13G238100 0.5kb upstream 0.5kb upstream 500 false Chr13: 34840142-34840641 Glycine max
Glyma.13G238100 0.5kb downstream 0.5kb downstream 5192 true Chr13: 34834950-34840141 Glycine max
Glyma.13G238100 0.5kb downstream 0.5kb downstream 500 false Chr13: 34834950-34835449 Glycine max
Glyma.13G238100 1.0kb upstream 1.0kb upstream 5692 true Chr13: 34835450-34841141 Glycine max
Glyma.13G238100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 34840142-34841141 Glycine max
Glyma.13G238100 1.0kb downstream 1.0kb downstream 5692 true Chr13: 34834450-34840141 Glycine max
Glyma.13G238100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 34834450-34835449 Glycine max
Glyma.13G238100 2.0kb upstream 2.0kb upstream 6692 true Chr13: 34835450-34842141 Glycine max
Glyma.13G238100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 34840142-34842141 Glycine max
Glyma.13G238100 2.0kb downstream 2.0kb downstream 6692 true Chr13: 34833450-34840141 Glycine max
Glyma.13G238100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 34833450-34835449 Glycine max
Glyma.13G238100 5.0kb upstream 5.0kb upstream 9692 true Chr13: 34835450-34845141 Glycine max
Glyma.13G238100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 34840142-34845141 Glycine max
Glyma.13G238100 5.0kb downstream 5.0kb downstream 9692 true Chr13: 34830450-34840141 Glycine max
Glyma.13G238100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 34830450-34835449 Glycine max
Glyma.13G238100 10.0kb upstream 10.0kb upstream 14692 true Chr13: 34835450-34850141 Glycine max
Glyma.13G238100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 34840142-34850141 Glycine max
Glyma.13G238100 10.0kb downstream 10.0kb downstream 14692 true Chr13: 34825450-34840141 Glycine max
Glyma.13G238100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 34825450-34835449 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307242 5265 Fabidae View MSA
124073802 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.6536 0.0 71.0534 High High
cufflinks 5.34009 0.0 20.4329    
cufflinks 9.81017 0.0 32.2462    
cufflinks 4.01041 0.0 16.8159    
cufflinks 4.81023 0.0 19.5226    
cufflinks 2.76511 0.0 9.96235    
cufflinks 0.85044 0.0 3.86469   Low
cufflinks 18.6175 0.0 58.2982   High
cufflinks 5.22008 0.0 20.5734    
cufflinks 2.219       High
cufflinks 0.316        
cufflinks 0.958       High
cufflinks 0.77        
cufflinks 0.27       Low
cufflinks 0.606        
cufflinks 0.673        
cufflinks 0.221       Low
cufflinks 0.517        
cufflinks 0.728        
cufflinks 0.527        
cufflinks 0.45        
cufflinks 0.709        
cufflinks 0.648        
cufflinks 0.282       Low
cufflinks 0.482        
cufflinks 0.382        

0 Strain