Gene : Glyma.13G238200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12399 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 Genomic Order:  2382
Name:  ? Glyma.13G238200 Secondary Identifier:  ? PAC:30501448
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G238200 0.5kb upstream 0.5kb upstream 5526 true Chr13: 34844479-34850004 Glycine max
Glyma.13G238200 0.5kb upstream 0.5kb upstream 500 false Chr13: 34849505-34850004 Glycine max
Glyma.13G238200 0.5kb downstream 0.5kb downstream 5526 true Chr13: 34843979-34849504 Glycine max
Glyma.13G238200 0.5kb downstream 0.5kb downstream 500 false Chr13: 34843979-34844478 Glycine max
Glyma.13G238200 1.0kb upstream 1.0kb upstream 6026 true Chr13: 34844479-34850504 Glycine max
Glyma.13G238200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 34849505-34850504 Glycine max
Glyma.13G238200 1.0kb downstream 1.0kb downstream 6026 true Chr13: 34843479-34849504 Glycine max
Glyma.13G238200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 34843479-34844478 Glycine max
Glyma.13G238200 2.0kb upstream 2.0kb upstream 7026 true Chr13: 34844479-34851504 Glycine max
Glyma.13G238200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 34849505-34851504 Glycine max
Glyma.13G238200 2.0kb downstream 2.0kb downstream 7026 true Chr13: 34842479-34849504 Glycine max
Glyma.13G238200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 34842479-34844478 Glycine max
Glyma.13G238200 5.0kb upstream 5.0kb upstream 10026 true Chr13: 34844479-34854504 Glycine max
Glyma.13G238200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 34849505-34854504 Glycine max
Glyma.13G238200 5.0kb downstream 5.0kb downstream 10026 true Chr13: 34839479-34849504 Glycine max
Glyma.13G238200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 34839479-34844478 Glycine max
Glyma.13G238200 10.0kb upstream 10.0kb upstream 15026 true Chr13: 34844479-34859504 Glycine max
Glyma.13G238200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 34849505-34859504 Glycine max
Glyma.13G238200 10.0kb downstream 10.0kb downstream 15026 true Chr13: 34834479-34849504 Glycine max
Glyma.13G238200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 34834479-34844478 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121608832 5273 Angiosperm Singleton cluster - no MSA
122240821 5265 Fabidae Singleton cluster - no MSA
123985798 5270 Rosid Singleton cluster - no MSA
123561190 5271 Pentapetalae Singleton cluster - no MSA
122595982 5272 Eudicot Singleton cluster - no MSA
121352111 5274 Embryophyte View MSA
123426210 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.64 0.0 147.741 High High
cufflinks 23.5643 0.0 97.1823 High  
cufflinks 22.4796 0.0 93.0586 High  
cufflinks 29.3081 0.0 125.869 High  
cufflinks 37.7603 0.0 176.895 High High
cufflinks 15.5596 0.0 54.7624   Low
cufflinks 23.003 0.0 95.6508 High  
cufflinks 30.4726 0.0 133.505 High  
cufflinks 23.4641 0.0 97.6778 High  
cufflinks 5.018        
cufflinks 1.452       Low
cufflinks 4.8        
cufflinks 7.122       High
cufflinks 9.576     High High
cufflinks 2.049       Low
cufflinks 4.116        
cufflinks 2.85        
cufflinks 4.276        
cufflinks 6.506       High
cufflinks 3.299        
cufflinks 2.256       Low
cufflinks 3.698        
cufflinks 4.839        
cufflinks 2.264       Low
cufflinks 3.493        
cufflinks 2.884        

0 Strain