Gene : Glyma.13G238500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31579:SF11 - EXPRESSED PROTEIN Genomic Order:  2385
Name:  ? Glyma.13G238500 Secondary Identifier:  ? PAC:30500118
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G238500 0.5kb upstream 0.5kb upstream 2847 true Chr13: 34884907-34887753 Glycine max
Glyma.13G238500 0.5kb upstream 0.5kb upstream 500 false Chr13: 34887254-34887753 Glycine max
Glyma.13G238500 0.5kb downstream 0.5kb downstream 2847 true Chr13: 34884407-34887253 Glycine max
Glyma.13G238500 0.5kb downstream 0.5kb downstream 500 false Chr13: 34884407-34884906 Glycine max
Glyma.13G238500 1.0kb upstream 1.0kb upstream 3347 true Chr13: 34884907-34888253 Glycine max
Glyma.13G238500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 34887254-34888253 Glycine max
Glyma.13G238500 1.0kb downstream 1.0kb downstream 3347 true Chr13: 34883907-34887253 Glycine max
Glyma.13G238500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 34883907-34884906 Glycine max
Glyma.13G238500 2.0kb upstream 2.0kb upstream 4347 true Chr13: 34884907-34889253 Glycine max
Glyma.13G238500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 34887254-34889253 Glycine max
Glyma.13G238500 2.0kb downstream 2.0kb downstream 4347 true Chr13: 34882907-34887253 Glycine max
Glyma.13G238500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 34882907-34884906 Glycine max
Glyma.13G238500 5.0kb upstream 5.0kb upstream 7347 true Chr13: 34884907-34892253 Glycine max
Glyma.13G238500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 34887254-34892253 Glycine max
Glyma.13G238500 5.0kb downstream 5.0kb downstream 7347 true Chr13: 34879907-34887253 Glycine max
Glyma.13G238500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 34879907-34884906 Glycine max
Glyma.13G238500 10.0kb upstream 10.0kb upstream 12347 true Chr13: 34884907-34897253 Glycine max
Glyma.13G238500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 34887254-34897253 Glycine max
Glyma.13G238500 10.0kb downstream 10.0kb downstream 12347 true Chr13: 34874907-34887253 Glycine max
Glyma.13G238500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 34874907-34884906 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303509 5265 Fabidae View MSA
124071276 5270 Rosid View MSA
123751272 5271 Pentapetalae View MSA
122785688 5272 Eudicot View MSA
122045708 5273 Angiosperm View MSA
123429021 5275 Viridiplantae View MSA
121310489 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.332537 0.0 1.2622   Low
cufflinks 0.582066 0.0 2.15351    
cufflinks 2.70506 0.0 8.70396    
cufflinks 7.82251 0.0 21.9145   High
cufflinks 2.029 0.0 6.80264    
cufflinks 3.19054 0.0 10.0614    
cufflinks 0.971863 0.0 3.48475    
cufflinks 0.371315 0.0 1.40231   Low
cufflinks 6.26164 0.0 18.011   High
cufflinks 0.583       Low
cufflinks 40.679     High High
cufflinks 6.586        
cufflinks 7.353     High  
cufflinks 2.941        
cufflinks 24.45     High High
cufflinks 5.848        
cufflinks 3.872        
cufflinks 7.032        
cufflinks 1.842        
cufflinks 4.466        
cufflinks 47.183     High High
cufflinks 1.842        
cufflinks 0.856       Low
cufflinks 18.12     High  
cufflinks 6.819        
cufflinks 24.507     High High

0 Strain