Gene : Glyma.13G238600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31561:SF21 - 3-KETOACYL-COA SYNTHASE 15 Genomic Order:  2386
Name:  ? Glyma.13G238600 Secondary Identifier:  ? PAC:30504858
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5080 Glycine max pathologic  
Gmax PWY-6433 Glycine max pathologic  
Gmax PWY-6598 Glycine max pathologic  
Gmax PWY-7036 Glycine max pathologic  
Gmax PWY-7601 Glycine max pathologic  
Gmax PWY-7619 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G238600 0.5kb upstream 0.5kb upstream 3486 true Chr13: 34896102-34899587 Glycine max
Glyma.13G238600 0.5kb upstream 0.5kb upstream 500 false Chr13: 34899088-34899587 Glycine max
Glyma.13G238600 0.5kb downstream 0.5kb downstream 3486 true Chr13: 34895602-34899087 Glycine max
Glyma.13G238600 0.5kb downstream 0.5kb downstream 500 false Chr13: 34895602-34896101 Glycine max
Glyma.13G238600 1.0kb upstream 1.0kb upstream 3986 true Chr13: 34896102-34900087 Glycine max
Glyma.13G238600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 34899088-34900087 Glycine max
Glyma.13G238600 1.0kb downstream 1.0kb downstream 3986 true Chr13: 34895102-34899087 Glycine max
Glyma.13G238600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 34895102-34896101 Glycine max
Glyma.13G238600 2.0kb upstream 2.0kb upstream 4986 true Chr13: 34896102-34901087 Glycine max
Glyma.13G238600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 34899088-34901087 Glycine max
Glyma.13G238600 2.0kb downstream 2.0kb downstream 4986 true Chr13: 34894102-34899087 Glycine max
Glyma.13G238600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 34894102-34896101 Glycine max
Glyma.13G238600 5.0kb upstream 5.0kb upstream 7986 true Chr13: 34896102-34904087 Glycine max
Glyma.13G238600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 34899088-34904087 Glycine max
Glyma.13G238600 5.0kb downstream 5.0kb downstream 7986 true Chr13: 34891102-34899087 Glycine max
Glyma.13G238600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 34891102-34896101 Glycine max
Glyma.13G238600 10.0kb upstream 10.0kb upstream 12986 true Chr13: 34896102-34909087 Glycine max
Glyma.13G238600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 34899088-34909087 Glycine max
Glyma.13G238600 10.0kb downstream 10.0kb downstream 12986 true Chr13: 34886102-34899087 Glycine max
Glyma.13G238600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 34886102-34896101 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791805 5273 Angiosperm View MSA
122299416 5265 Fabidae View MSA
124070288 5270 Rosid View MSA
123742604 5271 Pentapetalae View MSA
122793984 5272 Eudicot View MSA
121063095 5274 Embryophyte View MSA
123102879 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0284964 0.0 0.121061 Low  
cufflinks 0.0366547 0.0 0.151362 Low  
cufflinks 3.41024 0.0 12.4249   High
cufflinks 0.0101123 0.0 0.0490571 Low Low
cufflinks 0.267058 0.0 1.3185    
cufflinks 0.352622 0.0 1.71525    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0822211 0.0 0.324692 Low  
cufflinks 1.79743 0.0 6.25482   High
cufflinks 0.055     Low  
cufflinks 1.795       High
cufflinks 1.764       High
cufflinks 0.414        
cufflinks 0.202        
cufflinks 0.52        
cufflinks 0.099     Low  
cufflinks 0.311        
cufflinks 6.634       High
cufflinks 0.014     Low Low
cufflinks 0.043     Low  
cufflinks 0.984        
cufflinks 0.039     Low  
cufflinks 0.008     Low Low
cufflinks 0.76        
cufflinks 0.031     Low Low
cufflinks 0.746        

0 Strain