Gene : Glyma.13G240200 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 Genomic Order:  2402
Name:  ? Glyma.13G240200 Secondary Identifier:  ? PAC:30503928
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G240200 0.5kb upstream 0.5kb upstream 6044 true Chr13: 35022604-35028647 Glycine max
Glyma.13G240200 0.5kb upstream 0.5kb upstream 500 false Chr13: 35028148-35028647 Glycine max
Glyma.13G240200 0.5kb downstream 0.5kb downstream 6044 true Chr13: 35022104-35028147 Glycine max
Glyma.13G240200 0.5kb downstream 0.5kb downstream 500 false Chr13: 35022104-35022603 Glycine max
Glyma.13G240200 1.0kb upstream 1.0kb upstream 6544 true Chr13: 35022604-35029147 Glycine max
Glyma.13G240200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 35028148-35029147 Glycine max
Glyma.13G240200 1.0kb downstream 1.0kb downstream 6544 true Chr13: 35021604-35028147 Glycine max
Glyma.13G240200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 35021604-35022603 Glycine max
Glyma.13G240200 2.0kb upstream 2.0kb upstream 7544 true Chr13: 35022604-35030147 Glycine max
Glyma.13G240200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 35028148-35030147 Glycine max
Glyma.13G240200 2.0kb downstream 2.0kb downstream 7544 true Chr13: 35020604-35028147 Glycine max
Glyma.13G240200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 35020604-35022603 Glycine max
Glyma.13G240200 5.0kb upstream 5.0kb upstream 10544 true Chr13: 35022604-35033147 Glycine max
Glyma.13G240200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 35028148-35033147 Glycine max
Glyma.13G240200 5.0kb downstream 5.0kb downstream 10544 true Chr13: 35017604-35028147 Glycine max
Glyma.13G240200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 35017604-35022603 Glycine max
Glyma.13G240200 10.0kb upstream 10.0kb upstream 15544 true Chr13: 35022604-35038147 Glycine max
Glyma.13G240200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 35028148-35038147 Glycine max
Glyma.13G240200 10.0kb downstream 10.0kb downstream 15544 true Chr13: 35012604-35028147 Glycine max
Glyma.13G240200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 35012604-35022603 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302886 5265 Fabidae View MSA
124066526 5270 Rosid View MSA
123744370 5271 Pentapetalae View MSA
122786444 5272 Eudicot View MSA
122050833 5273 Angiosperm View MSA
121348139 5274 Embryophyte View MSA
123428671 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.29531 0.0 29.8665   Low
cufflinks 11.7618 0.0 45.2614    
cufflinks 8.54645 0.0 34.0935    
cufflinks 12.9243 0.0 49.415    
cufflinks 10.279 0.0 40.1694    
cufflinks 8.10912 0.0 29.4493    
cufflinks 19.4157 0.0 73.9334   High
cufflinks 8.47388 0.0 33.9885    
cufflinks 14.1731 0.0 53.9828    
cufflinks 1.235       Low
cufflinks 1.407        
cufflinks 1.603        
cufflinks 1.603        
cufflinks 1.798        
cufflinks 3.867       High
cufflinks 1.942        
cufflinks 0.928       Low
cufflinks 2.2        
cufflinks 1.779        
cufflinks 2.345        
cufflinks 1.407        
cufflinks 2.367        
cufflinks 1.587        
cufflinks 1.408        
cufflinks 2.25        
cufflinks 2.047        

0 Strain