Gene : Glyma.13G280500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22953//PTHR22953:SF39 - ACID PHOSPHATASE RELATED Genomic Order:  2805
Name:  ? Glyma.13G280500 Secondary Identifier:  ? PAC:30503140
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5083 Glycine max pathologic  
Gmax PWY-6348 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G280500 0.5kb upstream 0.5kb upstream 3396 true Chr13: 38176193-38179588 Glycine max
Glyma.13G280500 0.5kb upstream 0.5kb upstream 500 false Chr13: 38179089-38179588 Glycine max
Glyma.13G280500 0.5kb downstream 0.5kb downstream 3396 true Chr13: 38175693-38179088 Glycine max
Glyma.13G280500 0.5kb downstream 0.5kb downstream 500 false Chr13: 38175693-38176192 Glycine max
Glyma.13G280500 1.0kb upstream 1.0kb upstream 3896 true Chr13: 38176193-38180088 Glycine max
Glyma.13G280500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 38179089-38180088 Glycine max
Glyma.13G280500 1.0kb downstream 1.0kb downstream 3896 true Chr13: 38175193-38179088 Glycine max
Glyma.13G280500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 38175193-38176192 Glycine max
Glyma.13G280500 2.0kb upstream 2.0kb upstream 4896 true Chr13: 38176193-38181088 Glycine max
Glyma.13G280500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 38179089-38181088 Glycine max
Glyma.13G280500 2.0kb downstream 2.0kb downstream 4896 true Chr13: 38174193-38179088 Glycine max
Glyma.13G280500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 38174193-38176192 Glycine max
Glyma.13G280500 5.0kb upstream 5.0kb upstream 7896 true Chr13: 38176193-38184088 Glycine max
Glyma.13G280500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 38179089-38184088 Glycine max
Glyma.13G280500 5.0kb downstream 5.0kb downstream 7896 true Chr13: 38171193-38179088 Glycine max
Glyma.13G280500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 38171193-38176192 Glycine max
Glyma.13G280500 10.0kb upstream 10.0kb upstream 12896 true Chr13: 38176193-38189088 Glycine max
Glyma.13G280500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 38179089-38189088 Glycine max
Glyma.13G280500 10.0kb downstream 10.0kb downstream 12896 true Chr13: 38166193-38179088 Glycine max
Glyma.13G280500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 38166193-38176192 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255141 5265 Fabidae View MSA
124073856 5270 Rosid View MSA
123747428 5271 Pentapetalae View MSA
122789658 5272 Eudicot View MSA
122041724 5273 Angiosperm View MSA
121351600 5274 Embryophyte View MSA
123426131 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.028505 0.0 0.121474 Low  
cufflinks 0.111598 0.0 0.44255 Low  
cufflinks 0.105255 0.0 0.417719 Low  
cufflinks 0.100788 0.0 0.400862 Low  
cufflinks 0.0635601 0.0 0.257597 Low  
cufflinks 0.0791868 0.0 0.317891 Low  
cufflinks 0.00208169 0.0 0.0126249 Low Low
cufflinks 1.96334 0.0 6.5814   High
cufflinks 0.142616 0.0 0.560438 Low  
cufflinks 1.535       High
cufflinks 0.007     Low  
cufflinks 0.305       High
cufflinks 0.095        
cufflinks 0.004     Low Low
cufflinks 0.047     Low  
cufflinks 0.024     Low  
cufflinks 0.011     Low  
cufflinks 1.024       High
cufflinks 0.004     Low Low
cufflinks 0.05     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.043     Low  
cufflinks 0.048     Low  
cufflinks 0.006     Low Low
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain