Gene : Glyma.13G280600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11266:SF16 - PEROXISOMAL MEMBRANE (MPV17/PMP22) FAMILY PROTEIN Genomic Order:  2806
Name:  ? Glyma.13G280600 Secondary Identifier:  ? PAC:30502019
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G280600 0.5kb upstream 0.5kb upstream 4167 true Chr13: 38182118-38186284 Glycine max
Glyma.13G280600 0.5kb upstream 0.5kb upstream 500 false Chr13: 38185785-38186284 Glycine max
Glyma.13G280600 0.5kb downstream 0.5kb downstream 4167 true Chr13: 38181618-38185784 Glycine max
Glyma.13G280600 0.5kb downstream 0.5kb downstream 500 false Chr13: 38181618-38182117 Glycine max
Glyma.13G280600 1.0kb upstream 1.0kb upstream 4667 true Chr13: 38182118-38186784 Glycine max
Glyma.13G280600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 38185785-38186784 Glycine max
Glyma.13G280600 1.0kb downstream 1.0kb downstream 4667 true Chr13: 38181118-38185784 Glycine max
Glyma.13G280600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 38181118-38182117 Glycine max
Glyma.13G280600 2.0kb upstream 2.0kb upstream 5667 true Chr13: 38182118-38187784 Glycine max
Glyma.13G280600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 38185785-38187784 Glycine max
Glyma.13G280600 2.0kb downstream 2.0kb downstream 5667 true Chr13: 38180118-38185784 Glycine max
Glyma.13G280600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 38180118-38182117 Glycine max
Glyma.13G280600 5.0kb upstream 5.0kb upstream 8667 true Chr13: 38182118-38190784 Glycine max
Glyma.13G280600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 38185785-38190784 Glycine max
Glyma.13G280600 5.0kb downstream 5.0kb downstream 8667 true Chr13: 38177118-38185784 Glycine max
Glyma.13G280600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 38177118-38182117 Glycine max
Glyma.13G280600 10.0kb upstream 10.0kb upstream 13667 true Chr13: 38182118-38195784 Glycine max
Glyma.13G280600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 38185785-38195784 Glycine max
Glyma.13G280600 10.0kb downstream 10.0kb downstream 13667 true Chr13: 38172118-38185784 Glycine max
Glyma.13G280600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 38172118-38182117 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308604 5265 Fabidae View MSA
124069878 5270 Rosid View MSA
123741697 5271 Pentapetalae View MSA
122796269 5272 Eudicot View MSA
122044681 5273 Angiosperm View MSA
121345710 5274 Embryophyte View MSA
123428334 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 163.207 0.0 565.325 High High
cufflinks 14.7005 0.0 39.3134    
cufflinks 21.1951 0.0 56.5938 High  
cufflinks 14.9392 0.0 39.9385    
cufflinks 3.51266 0.0 10.6247    
cufflinks 8.8784 0.0 24.2763    
cufflinks 2.14573 0.0 6.98654   Low
cufflinks 8.04288 0.0 22.1924    
cufflinks 4.49276 0.0 13.174    
cufflinks 3.394        
cufflinks 4.157        
cufflinks 8.406     High  
cufflinks 1.578       Low
cufflinks 0.624       Low
cufflinks 3.221        
cufflinks 9.337     High  
cufflinks 4.479        
cufflinks 6.768        
cufflinks 5.323        
cufflinks 9.06     High  
cufflinks 5.845     High  
cufflinks 9.461     High  
cufflinks 7.651     High  
cufflinks 5.922        
cufflinks 9.618     High  
cufflinks 3.294        

0 Strain