Gene : Glyma.13G281700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21500 - TUBULIN-SPECIFIC CHAPERONE A Genomic Order:  2817
Name:  ? Glyma.13G281700 Secondary Identifier:  ? PAC:30502932
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G281700 0.5kb upstream 0.5kb upstream 3186 true Chr13: 38304211-38307396 Glycine max
Glyma.13G281700 0.5kb upstream 0.5kb upstream 500 false Chr13: 38306897-38307396 Glycine max
Glyma.13G281700 0.5kb downstream 0.5kb downstream 3186 true Chr13: 38303711-38306896 Glycine max
Glyma.13G281700 0.5kb downstream 0.5kb downstream 500 false Chr13: 38303711-38304210 Glycine max
Glyma.13G281700 1.0kb upstream 1.0kb upstream 3686 true Chr13: 38304211-38307896 Glycine max
Glyma.13G281700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 38306897-38307896 Glycine max
Glyma.13G281700 1.0kb downstream 1.0kb downstream 3686 true Chr13: 38303211-38306896 Glycine max
Glyma.13G281700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 38303211-38304210 Glycine max
Glyma.13G281700 2.0kb upstream 2.0kb upstream 4686 true Chr13: 38304211-38308896 Glycine max
Glyma.13G281700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 38306897-38308896 Glycine max
Glyma.13G281700 2.0kb downstream 2.0kb downstream 4686 true Chr13: 38302211-38306896 Glycine max
Glyma.13G281700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 38302211-38304210 Glycine max
Glyma.13G281700 5.0kb upstream 5.0kb upstream 7686 true Chr13: 38304211-38311896 Glycine max
Glyma.13G281700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 38306897-38311896 Glycine max
Glyma.13G281700 5.0kb downstream 5.0kb downstream 7686 true Chr13: 38299211-38306896 Glycine max
Glyma.13G281700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 38299211-38304210 Glycine max
Glyma.13G281700 10.0kb upstream 10.0kb upstream 12686 true Chr13: 38304211-38316896 Glycine max
Glyma.13G281700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 38306897-38316896 Glycine max
Glyma.13G281700 10.0kb downstream 10.0kb downstream 12686 true Chr13: 38294211-38306896 Glycine max
Glyma.13G281700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 38294211-38304210 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301088 5265 Fabidae View MSA
124063912 5270 Rosid View MSA
123749195 5271 Pentapetalae View MSA
122790493 5272 Eudicot View MSA
122044127 5273 Angiosperm View MSA
121349441 5274 Embryophyte View MSA
123428013 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.982357 0.0 6.36449   Low
cufflinks 11.6788 0.0 40.3851    
cufflinks 3.32419 0.0 16.5654    
cufflinks 11.9972 0.0 40.7673    
cufflinks 13.8191 0.0 45.6906    
cufflinks 14.1814 0.0 53.1371    
cufflinks 19.1955 0.0 67.7609    
cufflinks 13.0998 0.0 49.2438    
cufflinks 10.0711 0.0 35.62    
cufflinks 3.049       High
cufflinks 0.896        
cufflinks 1.783        
cufflinks 3.608       High
cufflinks 4.118       High
cufflinks 0.649       Low
cufflinks 0.906        
cufflinks 1.068        
cufflinks 3.443       High
cufflinks 2.629        
cufflinks 0.631       Low
cufflinks 1.018        
cufflinks 0.804        
cufflinks 1.109        
cufflinks 0.939        
cufflinks 0.909        
cufflinks 1.521        

0 Strain