Gene : Glyma.13G282800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33388:SF2 - NOZZLE/SPOROCYTELESS Genomic Order:  2828
Name:  ? Glyma.13G282800 Secondary Identifier:  ? PAC:30501819
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G282800 0.5kb upstream 0.5kb upstream 2025 true Chr13: 38399199-38401223 Glycine max
Glyma.13G282800 0.5kb upstream 0.5kb upstream 500 false Chr13: 38399199-38399698 Glycine max
Glyma.13G282800 0.5kb downstream 0.5kb downstream 2025 true Chr13: 38399699-38401723 Glycine max
Glyma.13G282800 0.5kb downstream 0.5kb downstream 500 false Chr13: 38401224-38401723 Glycine max
Glyma.13G282800 1.0kb upstream 1.0kb upstream 2525 true Chr13: 38398699-38401223 Glycine max
Glyma.13G282800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 38398699-38399698 Glycine max
Glyma.13G282800 1.0kb downstream 1.0kb downstream 2525 true Chr13: 38399699-38402223 Glycine max
Glyma.13G282800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 38401224-38402223 Glycine max
Glyma.13G282800 2.0kb upstream 2.0kb upstream 3525 true Chr13: 38397699-38401223 Glycine max
Glyma.13G282800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 38397699-38399698 Glycine max
Glyma.13G282800 2.0kb downstream 2.0kb downstream 3525 true Chr13: 38399699-38403223 Glycine max
Glyma.13G282800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 38401224-38403223 Glycine max
Glyma.13G282800 5.0kb upstream 5.0kb upstream 6525 true Chr13: 38394699-38401223 Glycine max
Glyma.13G282800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 38394699-38399698 Glycine max
Glyma.13G282800 5.0kb downstream 5.0kb downstream 6525 true Chr13: 38399699-38406223 Glycine max
Glyma.13G282800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 38401224-38406223 Glycine max
Glyma.13G282800 10.0kb upstream 10.0kb upstream 11525 true Chr13: 38389699-38401223 Glycine max
Glyma.13G282800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 38389699-38399698 Glycine max
Glyma.13G282800 10.0kb downstream 10.0kb downstream 11525 true Chr13: 38399699-38411223 Glycine max
Glyma.13G282800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 38401224-38411223 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299644 5265 Fabidae View MSA
124060444 5270 Rosid View MSA
123748975 5271 Pentapetalae View MSA
122797577 5272 Eudicot View MSA
122050804 5273 Angiosperm View MSA
121312135 5274 Embryophyte View MSA
123349336 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.112458 0.0 0.451097 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0505143 0.0 0.211395 Low  
cufflinks 0.0739351 0.0 0.302286 Low  
cufflinks 0.137612 0.0 0.54775 Low High
cufflinks 0.0388105 0.0 0.165496 Low Low
cufflinks 0.0599714 0.0 0.248247 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.042     Low  
cufflinks 0.232       High
cufflinks 0.044     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.314       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  

0 Strain