Gene : Glyma.13G285400 G. max Wm82.a2.v1
Defline:  (1 of 118) PF03514 - GRAS domain family (GRAS) Genomic Order:  2854
Name:  ? Glyma.13G285400 Secondary Identifier:  ? PAC:30503325
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G285400 0.5kb upstream 0.5kb upstream 4036 true Chr13: 38624145-38628180 Glycine max
Glyma.13G285400 0.5kb upstream 0.5kb upstream 500 false Chr13: 38627681-38628180 Glycine max
Glyma.13G285400 0.5kb downstream 0.5kb downstream 4036 true Chr13: 38623645-38627680 Glycine max
Glyma.13G285400 0.5kb downstream 0.5kb downstream 500 false Chr13: 38623645-38624144 Glycine max
Glyma.13G285400 1.0kb upstream 1.0kb upstream 4536 true Chr13: 38624145-38628680 Glycine max
Glyma.13G285400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 38627681-38628680 Glycine max
Glyma.13G285400 1.0kb downstream 1.0kb downstream 4536 true Chr13: 38623145-38627680 Glycine max
Glyma.13G285400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 38623145-38624144 Glycine max
Glyma.13G285400 2.0kb upstream 2.0kb upstream 5536 true Chr13: 38624145-38629680 Glycine max
Glyma.13G285400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 38627681-38629680 Glycine max
Glyma.13G285400 2.0kb downstream 2.0kb downstream 5536 true Chr13: 38622145-38627680 Glycine max
Glyma.13G285400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 38622145-38624144 Glycine max
Glyma.13G285400 5.0kb upstream 5.0kb upstream 8536 true Chr13: 38624145-38632680 Glycine max
Glyma.13G285400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 38627681-38632680 Glycine max
Glyma.13G285400 5.0kb downstream 5.0kb downstream 8536 true Chr13: 38619145-38627680 Glycine max
Glyma.13G285400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 38619145-38624144 Glycine max
Glyma.13G285400 10.0kb upstream 10.0kb upstream 13536 true Chr13: 38624145-38637680 Glycine max
Glyma.13G285400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 38627681-38637680 Glycine max
Glyma.13G285400 10.0kb downstream 10.0kb downstream 13536 true Chr13: 38614145-38627680 Glycine max
Glyma.13G285400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 38614145-38624144 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305990 5265 Fabidae View MSA
124070191 5270 Rosid View MSA
123743209 5271 Pentapetalae View MSA
122794651 5272 Eudicot View MSA
122048977 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.56025 0.0 20.3423   High
cufflinks 0.833612 0.0 2.88002   Low
cufflinks 4.9729 0.0 13.7148   High
cufflinks 1.32926 0.0 4.33418    
cufflinks 2.11212 0.0 6.45921    
cufflinks 3.61954 0.0 10.3116    
cufflinks 1.62447 0.0 5.15949    
cufflinks 0.865777 0.0 2.97309   Low
cufflinks 1.29563 0.0 4.24628    
cufflinks 42.972     High  
cufflinks 141.001     High High
cufflinks 18.882     High  
cufflinks 12.329     High  
cufflinks 2.751       Low
cufflinks 182.432     High High
cufflinks 6.599        
cufflinks 537.539     High High
cufflinks 20.861     High  
cufflinks 1.461       Low
cufflinks 2.073       Low
cufflinks 111.008     High  
cufflinks 2.373       Low
cufflinks 5.512        
cufflinks 70.417     High  
cufflinks 2.27       Low
cufflinks 254.628     High High

0 Strain