Gene : Glyma.13G285700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10366//PTHR10366:SF350 - NAD DEPENDENT EPIMERASE/DEHYDRATASE Genomic Order:  2857
Name:  ? Glyma.13G285700 Secondary Identifier:  ? PAC:30500670
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY1F-823 Glycine max pathologic  
Gmax PWY-5152 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G285700 0.5kb upstream 0.5kb upstream 2939 true Chr13: 38656518-38659456 Glycine max
Glyma.13G285700 0.5kb upstream 0.5kb upstream 500 false Chr13: 38656518-38657017 Glycine max
Glyma.13G285700 0.5kb downstream 0.5kb downstream 2939 true Chr13: 38657018-38659956 Glycine max
Glyma.13G285700 0.5kb downstream 0.5kb downstream 500 false Chr13: 38659457-38659956 Glycine max
Glyma.13G285700 1.0kb upstream 1.0kb upstream 3439 true Chr13: 38656018-38659456 Glycine max
Glyma.13G285700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 38656018-38657017 Glycine max
Glyma.13G285700 1.0kb downstream 1.0kb downstream 3439 true Chr13: 38657018-38660456 Glycine max
Glyma.13G285700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 38659457-38660456 Glycine max
Glyma.13G285700 2.0kb upstream 2.0kb upstream 4439 true Chr13: 38655018-38659456 Glycine max
Glyma.13G285700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 38655018-38657017 Glycine max
Glyma.13G285700 2.0kb downstream 2.0kb downstream 4439 true Chr13: 38657018-38661456 Glycine max
Glyma.13G285700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 38659457-38661456 Glycine max
Glyma.13G285700 5.0kb upstream 5.0kb upstream 7439 true Chr13: 38652018-38659456 Glycine max
Glyma.13G285700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 38652018-38657017 Glycine max
Glyma.13G285700 5.0kb downstream 5.0kb downstream 7439 true Chr13: 38657018-38664456 Glycine max
Glyma.13G285700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 38659457-38664456 Glycine max
Glyma.13G285700 10.0kb upstream 10.0kb upstream 12439 true Chr13: 38647018-38659456 Glycine max
Glyma.13G285700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 38647018-38657017 Glycine max
Glyma.13G285700 10.0kb downstream 10.0kb downstream 12439 true Chr13: 38657018-38669456 Glycine max
Glyma.13G285700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 38659457-38669456 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313544 5265 Fabidae View MSA
124073853 5270 Rosid View MSA
123752094 5271 Pentapetalae View MSA
122797549 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0602845 0.0 0.272638 Low Low
cufflinks 1.04026 0.0 3.99521    
cufflinks 0.794786 0.0 3.08218    
cufflinks 1.5198 0.0 5.73979    
cufflinks 2.1153 0.0 7.86892    
cufflinks 6.91583 0.0 23.6829    
cufflinks 11.3206 0.0 36.4423   High
cufflinks 0.014092 0.0 0.0744174 Low Low
cufflinks 5.12994 0.0 18.0208    
cufflinks 0.043     Low Low
cufflinks 6.344     High High
cufflinks 0.441        
cufflinks 1.2        
cufflinks 0.992        
cufflinks 1.24        
cufflinks 0.247        
cufflinks 0.221        
cufflinks 0.315        
cufflinks 0.562        
cufflinks 0.379        
cufflinks 6.143     High High
cufflinks 0.408        
cufflinks 0.293        
cufflinks 6.286     High High
cufflinks 0.238        
cufflinks 0.976        

0 Strain