Gene : Glyma.13G286500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33399:SF2 - PSBQ-LIKE PROTEIN 2, CHLOROPLASTIC Genomic Order:  2865
Name:  ? Glyma.13G286500 Secondary Identifier:  ? PAC:30504145
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G286500 0.5kb upstream 0.5kb upstream 2188 true Chr13: 38712282-38714469 Glycine max
Glyma.13G286500 0.5kb upstream 0.5kb upstream 500 false Chr13: 38713970-38714469 Glycine max
Glyma.13G286500 0.5kb downstream 0.5kb downstream 2188 true Chr13: 38711782-38713969 Glycine max
Glyma.13G286500 0.5kb downstream 0.5kb downstream 500 false Chr13: 38711782-38712281 Glycine max
Glyma.13G286500 1.0kb upstream 1.0kb upstream 2688 true Chr13: 38712282-38714969 Glycine max
Glyma.13G286500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 38713970-38714969 Glycine max
Glyma.13G286500 1.0kb downstream 1.0kb downstream 2688 true Chr13: 38711282-38713969 Glycine max
Glyma.13G286500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 38711282-38712281 Glycine max
Glyma.13G286500 2.0kb upstream 2.0kb upstream 3688 true Chr13: 38712282-38715969 Glycine max
Glyma.13G286500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 38713970-38715969 Glycine max
Glyma.13G286500 2.0kb downstream 2.0kb downstream 3688 true Chr13: 38710282-38713969 Glycine max
Glyma.13G286500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 38710282-38712281 Glycine max
Glyma.13G286500 5.0kb upstream 5.0kb upstream 6688 true Chr13: 38712282-38718969 Glycine max
Glyma.13G286500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 38713970-38718969 Glycine max
Glyma.13G286500 5.0kb downstream 5.0kb downstream 6688 true Chr13: 38707282-38713969 Glycine max
Glyma.13G286500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 38707282-38712281 Glycine max
Glyma.13G286500 10.0kb upstream 10.0kb upstream 11688 true Chr13: 38712282-38723969 Glycine max
Glyma.13G286500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 38713970-38723969 Glycine max
Glyma.13G286500 10.0kb downstream 10.0kb downstream 11688 true Chr13: 38702282-38713969 Glycine max
Glyma.13G286500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 38702282-38712281 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306753 5265 Fabidae View MSA
124061827 5270 Rosid View MSA
123739872 5271 Pentapetalae View MSA
122789340 5272 Eudicot View MSA
122046356 5273 Angiosperm View MSA
121310593 5274 Embryophyte View MSA
123348038 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.4335 0.0 14.2348   High
cufflinks 1.19022 0.0 4.32989   High
cufflinks 0.11242 0.0 0.452463 Low  
cufflinks 0.452238 0.0 1.72471    
cufflinks 0.0585853 0.0 0.245171 Low Low
cufflinks 0.169759 0.0 0.674202 Low  
cufflinks 0.33364 0.0 1.29215    
cufflinks 0.221865 0.0 0.871313 Low  
cufflinks 0.0667777 0.0 0.276422 Low Low
cufflinks 0.238        
cufflinks 0.046     Low  
cufflinks 0.168        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 11.169     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.361        
cufflinks 0.368        
cufflinks 20.03     High High
cufflinks 0.01     Low Low
cufflinks 15.034     High High
cufflinks 7.742     High  
cufflinks 0.081        
cufflinks 16.914     High High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain