Gene : Glyma.13G288400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22957//PTHR22957:SF276 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN Genomic Order:  2884
Name:  ? Glyma.13G288400 Secondary Identifier:  ? PAC:30502367
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G288400 0.5kb upstream 0.5kb upstream 8288 true Chr13: 38889339-38897626 Glycine max
Glyma.13G288400 0.5kb upstream 0.5kb upstream 500 false Chr13: 38897127-38897626 Glycine max
Glyma.13G288400 0.5kb downstream 0.5kb downstream 8288 true Chr13: 38888839-38897126 Glycine max
Glyma.13G288400 0.5kb downstream 0.5kb downstream 500 false Chr13: 38888839-38889338 Glycine max
Glyma.13G288400 1.0kb upstream 1.0kb upstream 8788 true Chr13: 38889339-38898126 Glycine max
Glyma.13G288400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 38897127-38898126 Glycine max
Glyma.13G288400 1.0kb downstream 1.0kb downstream 8788 true Chr13: 38888339-38897126 Glycine max
Glyma.13G288400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 38888339-38889338 Glycine max
Glyma.13G288400 2.0kb upstream 2.0kb upstream 9788 true Chr13: 38889339-38899126 Glycine max
Glyma.13G288400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 38897127-38899126 Glycine max
Glyma.13G288400 2.0kb downstream 2.0kb downstream 9788 true Chr13: 38887339-38897126 Glycine max
Glyma.13G288400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 38887339-38889338 Glycine max
Glyma.13G288400 5.0kb upstream 5.0kb upstream 12788 true Chr13: 38889339-38902126 Glycine max
Glyma.13G288400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 38897127-38902126 Glycine max
Glyma.13G288400 5.0kb downstream 5.0kb downstream 12788 true Chr13: 38884339-38897126 Glycine max
Glyma.13G288400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 38884339-38889338 Glycine max
Glyma.13G288400 10.0kb upstream 10.0kb upstream 17788 true Chr13: 38889339-38907126 Glycine max
Glyma.13G288400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 38897127-38907126 Glycine max
Glyma.13G288400 10.0kb downstream 10.0kb downstream 17788 true Chr13: 38879339-38897126 Glycine max
Glyma.13G288400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 38879339-38889338 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314128 5265 Fabidae View MSA
124064798 5270 Rosid View MSA
123749746 5271 Pentapetalae View MSA
122789971 5272 Eudicot View MSA
122046428 5273 Angiosperm View MSA
121350403 5274 Embryophyte View MSA
123428253 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.1075 0.0 29.853    
cufflinks 9.17437 0.0 24.8617    
cufflinks 7.43922 0.0 20.4106   Low
cufflinks 16.4389 0.0 43.8595    
cufflinks 10.6468 0.0 28.6686    
cufflinks 30.5199 0.0 83.2123 High High
cufflinks 13.2255 0.0 35.3659    
cufflinks 15.3635 0.0 40.9912    
cufflinks 13.4786 0.0 36.0155    
cufflinks 4.791        
cufflinks 5.223        
cufflinks 2.435       Low
cufflinks 4.207        
cufflinks 3.175        
cufflinks 2.263       Low
cufflinks 4.566        
cufflinks 6.326     High High
cufflinks 3.527        
cufflinks 2.56       Low
cufflinks 4.051        
cufflinks 4.359        
cufflinks 4.412        
cufflinks 3.259        
cufflinks 5.415       High
cufflinks 3.947        
cufflinks 5.956       High

0 Strain