Gene : Glyma.13G276000 G. max Wm82.a2.v1
Defline:  (1 of 3) 3.1.3.77//3.1.3.87//4.2.1.109//5.3.2.5 - Acireductone synthase / E-1 enolase-phosphatase // 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase / HK-MTPenyl-1-P phosphatase // Methylthioribulose 1-phosphate dehydratase / 1-PMT-ribulose dehydratase // 2,3-diketo-5-methylthiopentyl-1-phosphate enolase / RuBisCO-like protein Genomic Order:  2760
Name:  ? Glyma.13G276000 Secondary Identifier:  ? PAC:30501340
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-4361 Glycine max pathologic  
Gmax PWY-7270 Glycine max pathologic  
Gmax PWY-7528 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G276000 0.5kb upstream 0.5kb upstream 7923 true Chr13: 37746741-37754663 Glycine max
Glyma.13G276000 0.5kb upstream 0.5kb upstream 500 false Chr13: 37746741-37747240 Glycine max
Glyma.13G276000 0.5kb downstream 0.5kb downstream 7923 true Chr13: 37747241-37755163 Glycine max
Glyma.13G276000 0.5kb downstream 0.5kb downstream 500 false Chr13: 37754664-37755163 Glycine max
Glyma.13G276000 1.0kb upstream 1.0kb upstream 8423 true Chr13: 37746241-37754663 Glycine max
Glyma.13G276000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 37746241-37747240 Glycine max
Glyma.13G276000 1.0kb downstream 1.0kb downstream 8423 true Chr13: 37747241-37755663 Glycine max
Glyma.13G276000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 37754664-37755663 Glycine max
Glyma.13G276000 2.0kb upstream 2.0kb upstream 9423 true Chr13: 37745241-37754663 Glycine max
Glyma.13G276000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 37745241-37747240 Glycine max
Glyma.13G276000 2.0kb downstream 2.0kb downstream 9423 true Chr13: 37747241-37756663 Glycine max
Glyma.13G276000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 37754664-37756663 Glycine max
Glyma.13G276000 5.0kb upstream 5.0kb upstream 12423 true Chr13: 37742241-37754663 Glycine max
Glyma.13G276000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 37742241-37747240 Glycine max
Glyma.13G276000 5.0kb downstream 5.0kb downstream 12423 true Chr13: 37747241-37759663 Glycine max
Glyma.13G276000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 37754664-37759663 Glycine max
Glyma.13G276000 10.0kb upstream 10.0kb upstream 17423 true Chr13: 37737241-37754663 Glycine max
Glyma.13G276000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 37737241-37747240 Glycine max
Glyma.13G276000 10.0kb downstream 10.0kb downstream 17423 true Chr13: 37747241-37764663 Glycine max
Glyma.13G276000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 37754664-37764663 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306474 5265 Fabidae View MSA
124067379 5270 Rosid View MSA
123736573 5271 Pentapetalae View MSA
122786615 5272 Eudicot View MSA
122042020 5273 Angiosperm View MSA
121345843 5274 Embryophyte View MSA
123425019 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.1862 0.0 89.0209 High  
cufflinks 22.7547 0.0 79.3628 High  
cufflinks 29.2134 0.0 105.13 High  
cufflinks 36.7133 0.0 137.747 High High
cufflinks 19.514 0.0 67.5781   Low
cufflinks 20.5725 0.0 61.5662   Low
cufflinks 37.7459 0.0 141.225 High High
cufflinks 28.7132 0.0 103.059 High  
cufflinks 28.192 0.0 101.003 High  
cufflinks 2.094        
cufflinks 1.144       Low
cufflinks 2.998       High
cufflinks 1.625        
cufflinks 1.213       Low
cufflinks 2.234        
cufflinks 2.612        
cufflinks 3.116       High
cufflinks 2.429        
cufflinks 2.147        
cufflinks 3.092       High
cufflinks 1.34       Low
cufflinks 2.834        
cufflinks 2.171        
cufflinks 1.227       Low
cufflinks 2.8        
cufflinks 1.454        

0 Strain