Gene : Glyma.13G276100 G. max Wm82.a2.v1
Defline:  (1 of 75) PF05678 - VQ motif (VQ) Genomic Order:  2761
Name:  ? Glyma.13G276100 Secondary Identifier:  ? PAC:30502025
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G276100 0.5kb upstream 0.5kb upstream 3226 true Chr13: 37756820-37760045 Glycine max
Glyma.13G276100 0.5kb upstream 0.5kb upstream 500 false Chr13: 37759546-37760045 Glycine max
Glyma.13G276100 0.5kb downstream 0.5kb downstream 3226 true Chr13: 37756320-37759545 Glycine max
Glyma.13G276100 0.5kb downstream 0.5kb downstream 500 false Chr13: 37756320-37756819 Glycine max
Glyma.13G276100 1.0kb upstream 1.0kb upstream 3726 true Chr13: 37756820-37760545 Glycine max
Glyma.13G276100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 37759546-37760545 Glycine max
Glyma.13G276100 1.0kb downstream 1.0kb downstream 3726 true Chr13: 37755820-37759545 Glycine max
Glyma.13G276100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 37755820-37756819 Glycine max
Glyma.13G276100 2.0kb upstream 2.0kb upstream 4726 true Chr13: 37756820-37761545 Glycine max
Glyma.13G276100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 37759546-37761545 Glycine max
Glyma.13G276100 2.0kb downstream 2.0kb downstream 4726 true Chr13: 37754820-37759545 Glycine max
Glyma.13G276100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 37754820-37756819 Glycine max
Glyma.13G276100 5.0kb upstream 5.0kb upstream 7726 true Chr13: 37756820-37764545 Glycine max
Glyma.13G276100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 37759546-37764545 Glycine max
Glyma.13G276100 5.0kb downstream 5.0kb downstream 7726 true Chr13: 37751820-37759545 Glycine max
Glyma.13G276100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 37751820-37756819 Glycine max
Glyma.13G276100 10.0kb upstream 10.0kb upstream 12726 true Chr13: 37756820-37769545 Glycine max
Glyma.13G276100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 37759546-37769545 Glycine max
Glyma.13G276100 10.0kb downstream 10.0kb downstream 12726 true Chr13: 37746820-37759545 Glycine max
Glyma.13G276100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 37746820-37756819 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311492 5265 Fabidae View MSA
124073802 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.3041 0.0 25.0136    
cufflinks 4.85234 0.0 13.6324   Low
cufflinks 18.4822 0.0 49.5961   High
cufflinks 15.5812 0.0 41.6341    
cufflinks 7.94767 0.0 21.5236    
cufflinks 18.1398 0.0 48.6109   High
cufflinks 7.42317 0.0 20.1747    
cufflinks 12.0946 0.0 32.2759    
cufflinks 7.61874 0.0 20.6529    
cufflinks 3.397       Low
cufflinks 12.405     High  
cufflinks 13.097     High High
cufflinks 5.926        
cufflinks 4.709       Low
cufflinks 6.889     High  
cufflinks 7.375     High  
cufflinks 5.474        
cufflinks 10.143     High  
cufflinks 6.445        
cufflinks 7.595     High  
cufflinks 9.511     High  
cufflinks 7.866     High  
cufflinks 7.36        
cufflinks 21.796     High High
cufflinks 6.593        
cufflinks 12.978     High High

0 Strain