Gene : Glyma.13G276300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11229 - 50S RIBOSOMAL PROTEIN L3 Genomic Order:  2763
Name:  ? Glyma.13G276300 Secondary Identifier:  ? PAC:30505573
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G276300 0.5kb upstream 0.5kb upstream 4258 true Chr13: 37780056-37784313 Glycine max
Glyma.13G276300 0.5kb upstream 0.5kb upstream 500 false Chr13: 37780056-37780555 Glycine max
Glyma.13G276300 0.5kb downstream 0.5kb downstream 4258 true Chr13: 37780556-37784813 Glycine max
Glyma.13G276300 0.5kb downstream 0.5kb downstream 500 false Chr13: 37784314-37784813 Glycine max
Glyma.13G276300 1.0kb upstream 1.0kb upstream 4758 true Chr13: 37779556-37784313 Glycine max
Glyma.13G276300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 37779556-37780555 Glycine max
Glyma.13G276300 1.0kb downstream 1.0kb downstream 4758 true Chr13: 37780556-37785313 Glycine max
Glyma.13G276300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 37784314-37785313 Glycine max
Glyma.13G276300 2.0kb upstream 2.0kb upstream 5758 true Chr13: 37778556-37784313 Glycine max
Glyma.13G276300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 37778556-37780555 Glycine max
Glyma.13G276300 2.0kb downstream 2.0kb downstream 5758 true Chr13: 37780556-37786313 Glycine max
Glyma.13G276300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 37784314-37786313 Glycine max
Glyma.13G276300 5.0kb upstream 5.0kb upstream 8758 true Chr13: 37775556-37784313 Glycine max
Glyma.13G276300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 37775556-37780555 Glycine max
Glyma.13G276300 5.0kb downstream 5.0kb downstream 8758 true Chr13: 37780556-37789313 Glycine max
Glyma.13G276300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 37784314-37789313 Glycine max
Glyma.13G276300 10.0kb upstream 10.0kb upstream 13758 true Chr13: 37770556-37784313 Glycine max
Glyma.13G276300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 37770556-37780555 Glycine max
Glyma.13G276300 10.0kb downstream 10.0kb downstream 13758 true Chr13: 37780556-37794313 Glycine max
Glyma.13G276300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 37784314-37794313 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041501 5273 Angiosperm View MSA
122305263 5265 Fabidae View MSA
124071228 5270 Rosid View MSA
123739154 5271 Pentapetalae View MSA
122789035 5272 Eudicot View MSA
121347550 5274 Embryophyte View MSA
123425117 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.1404 0.0 25.5764    
cufflinks 8.10051 0.0 22.9767    
cufflinks 3.43984 0.0 10.9349   Low
cufflinks 7.03939 0.0 20.2593    
cufflinks 12.9304 0.0 35.1556   High
cufflinks 10.44 0.0 28.8245    
cufflinks 9.71843 0.0 27.0063    
cufflinks 7.61941 0.0 21.7513    
cufflinks 10.7093 0.0 29.538    
cufflinks 2.455        
cufflinks 0.51       Low
cufflinks 2.19        
cufflinks 6.979       High
cufflinks 9.46     High High
cufflinks 0.603       Low
cufflinks 1.554        
cufflinks 1.59        
cufflinks 2.128        
cufflinks 3.403        
cufflinks 0.951        
cufflinks 0.925        
cufflinks 1.08        
cufflinks 2.015        
cufflinks 0.582       Low
cufflinks 1.104        
cufflinks 1.425        

0 Strain