Gene : Glyma.13G278300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12385//PTHR12385:SF47 - CTL TRANSPORTER Genomic Order:  2783
Name:  ? Glyma.13G278300 Secondary Identifier:  ? PAC:30504182
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G278300 0.5kb upstream 0.5kb upstream 7566 true Chr13: 37940778-37948343 Glycine max
Glyma.13G278300 0.5kb upstream 0.5kb upstream 500 false Chr13: 37940778-37941277 Glycine max
Glyma.13G278300 0.5kb downstream 0.5kb downstream 7566 true Chr13: 37941278-37948843 Glycine max
Glyma.13G278300 0.5kb downstream 0.5kb downstream 500 false Chr13: 37948344-37948843 Glycine max
Glyma.13G278300 1.0kb upstream 1.0kb upstream 8066 true Chr13: 37940278-37948343 Glycine max
Glyma.13G278300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 37940278-37941277 Glycine max
Glyma.13G278300 1.0kb downstream 1.0kb downstream 8066 true Chr13: 37941278-37949343 Glycine max
Glyma.13G278300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 37948344-37949343 Glycine max
Glyma.13G278300 2.0kb upstream 2.0kb upstream 9066 true Chr13: 37939278-37948343 Glycine max
Glyma.13G278300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 37939278-37941277 Glycine max
Glyma.13G278300 2.0kb downstream 2.0kb downstream 9066 true Chr13: 37941278-37950343 Glycine max
Glyma.13G278300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 37948344-37950343 Glycine max
Glyma.13G278300 5.0kb upstream 5.0kb upstream 12066 true Chr13: 37936278-37948343 Glycine max
Glyma.13G278300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 37936278-37941277 Glycine max
Glyma.13G278300 5.0kb downstream 5.0kb downstream 12066 true Chr13: 37941278-37953343 Glycine max
Glyma.13G278300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 37948344-37953343 Glycine max
Glyma.13G278300 10.0kb upstream 10.0kb upstream 17066 true Chr13: 37931278-37948343 Glycine max
Glyma.13G278300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 37931278-37941277 Glycine max
Glyma.13G278300 10.0kb downstream 10.0kb downstream 17066 true Chr13: 37941278-37958343 Glycine max
Glyma.13G278300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 37948344-37958343 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297015 5265 Fabidae View MSA
124068614 5270 Rosid View MSA
123746416 5271 Pentapetalae View MSA
122790584 5272 Eudicot View MSA
122045224 5273 Angiosperm View MSA
121347248 5274 Embryophyte View MSA
123428295 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.69602 0.0 4.10532   Low
cufflinks 6.93446 0.0 21.8724   High
cufflinks 1.86399 0.0 6.29803    
cufflinks 6.38225 0.0 20.373    
cufflinks 1.84764 0.0 8.74955    
cufflinks 0.931364 0.0 5.07878   Low
cufflinks 9.71525 0.0 29.3246   High
cufflinks 4.15813 0.0 14.5338    
cufflinks 2.00935 0.0 9.1184    
cufflinks 0.3        
cufflinks 0.082       Low
cufflinks 0.795        
cufflinks 0.429        
cufflinks 0.48        
cufflinks 0.1       Low
cufflinks 0.607        
cufflinks 0.19        
cufflinks 0.751        
cufflinks 1.676       High
cufflinks 0.689        
cufflinks 0.083       Low
cufflinks 0.796        
cufflinks 1.426       High
cufflinks 0.051     Low Low
cufflinks 0.578        
cufflinks 0.168        

0 Strain