Gene : Glyma.13G278500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11089:SF9 - NUCLEOLAR GTP-BINDING PROTEIN 2 Genomic Order:  2785
Name:  ? Glyma.13G278500 Secondary Identifier:  ? PAC:30503017
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G278500 0.5kb upstream 0.5kb upstream 6111 true Chr13: 37963692-37969802 Glycine max
Glyma.13G278500 0.5kb upstream 0.5kb upstream 500 false Chr13: 37969303-37969802 Glycine max
Glyma.13G278500 0.5kb downstream 0.5kb downstream 6111 true Chr13: 37963192-37969302 Glycine max
Glyma.13G278500 0.5kb downstream 0.5kb downstream 500 false Chr13: 37963192-37963691 Glycine max
Glyma.13G278500 1.0kb upstream 1.0kb upstream 6611 true Chr13: 37963692-37970302 Glycine max
Glyma.13G278500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 37969303-37970302 Glycine max
Glyma.13G278500 1.0kb downstream 1.0kb downstream 6611 true Chr13: 37962692-37969302 Glycine max
Glyma.13G278500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 37962692-37963691 Glycine max
Glyma.13G278500 2.0kb upstream 2.0kb upstream 7611 true Chr13: 37963692-37971302 Glycine max
Glyma.13G278500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 37969303-37971302 Glycine max
Glyma.13G278500 2.0kb downstream 2.0kb downstream 7611 true Chr13: 37961692-37969302 Glycine max
Glyma.13G278500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 37961692-37963691 Glycine max
Glyma.13G278500 5.0kb upstream 5.0kb upstream 10611 true Chr13: 37963692-37974302 Glycine max
Glyma.13G278500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 37969303-37974302 Glycine max
Glyma.13G278500 5.0kb downstream 5.0kb downstream 10611 true Chr13: 37958692-37969302 Glycine max
Glyma.13G278500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 37958692-37963691 Glycine max
Glyma.13G278500 10.0kb upstream 10.0kb upstream 15611 true Chr13: 37963692-37979302 Glycine max
Glyma.13G278500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 37969303-37979302 Glycine max
Glyma.13G278500 10.0kb downstream 10.0kb downstream 15611 true Chr13: 37953692-37969302 Glycine max
Glyma.13G278500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 37953692-37963691 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040874 5273 Angiosperm View MSA
122299235 5265 Fabidae View MSA
124066525 5270 Rosid View MSA
123744991 5271 Pentapetalae View MSA
122793038 5272 Eudicot View MSA
121344616 5274 Embryophyte View MSA
123427861 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.4904 0.0 58.0203    
cufflinks 18.1286 0.0 48.6061    
cufflinks 13.545 0.0 36.1378   Low
cufflinks 13.9419 0.0 37.2016   Low
cufflinks 25.0994 0.0 68.4293 High High
cufflinks 17.7212 0.0 47.4862    
cufflinks 22.8298 0.0 61.8383 High High
cufflinks 17.9174 0.0 48.039    
cufflinks 15.5122 0.0 41.4356    
cufflinks 6.735        
cufflinks 3.695       Low
cufflinks 7.051        
cufflinks 12.773     High High
cufflinks 16.444     High High
cufflinks 5.656     High  
cufflinks 6.834        
cufflinks 5.143        
cufflinks 6.652        
cufflinks 9.835     High  
cufflinks 6.395        
cufflinks 5.002        
cufflinks 6.592        
cufflinks 9.067     High  
cufflinks 4.109       Low
cufflinks 6.856        
cufflinks 5.554        

0 Strain