Gene : Glyma.13G279000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22870:SF209 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 Genomic Order:  2790
Name:  ? Glyma.13G279000 Secondary Identifier:  ? PAC:30500310
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G279000 0.5kb upstream 0.5kb upstream 5842 true Chr13: 38006401-38012242 Glycine max
Glyma.13G279000 0.5kb upstream 0.5kb upstream 500 false Chr13: 38006401-38006900 Glycine max
Glyma.13G279000 0.5kb downstream 0.5kb downstream 5842 true Chr13: 38006901-38012742 Glycine max
Glyma.13G279000 0.5kb downstream 0.5kb downstream 500 false Chr13: 38012243-38012742 Glycine max
Glyma.13G279000 1.0kb upstream 1.0kb upstream 6342 true Chr13: 38005901-38012242 Glycine max
Glyma.13G279000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 38005901-38006900 Glycine max
Glyma.13G279000 1.0kb downstream 1.0kb downstream 6342 true Chr13: 38006901-38013242 Glycine max
Glyma.13G279000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 38012243-38013242 Glycine max
Glyma.13G279000 2.0kb upstream 2.0kb upstream 7342 true Chr13: 38004901-38012242 Glycine max
Glyma.13G279000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 38004901-38006900 Glycine max
Glyma.13G279000 2.0kb downstream 2.0kb downstream 7342 true Chr13: 38006901-38014242 Glycine max
Glyma.13G279000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 38012243-38014242 Glycine max
Glyma.13G279000 5.0kb upstream 5.0kb upstream 10342 true Chr13: 38001901-38012242 Glycine max
Glyma.13G279000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 38001901-38006900 Glycine max
Glyma.13G279000 5.0kb downstream 5.0kb downstream 10342 true Chr13: 38006901-38017242 Glycine max
Glyma.13G279000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 38012243-38017242 Glycine max
Glyma.13G279000 10.0kb upstream 10.0kb upstream 15342 true Chr13: 37996901-38012242 Glycine max
Glyma.13G279000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 37996901-38006900 Glycine max
Glyma.13G279000 10.0kb downstream 10.0kb downstream 15342 true Chr13: 38006901-38022242 Glycine max
Glyma.13G279000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 38012243-38022242 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041443 5273 Angiosperm View MSA
122299269 5265 Fabidae View MSA
124063197 5270 Rosid View MSA
123736907 5271 Pentapetalae View MSA
122790897 5272 Eudicot View MSA
121345963 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.1145 0.0 29.7173   Low
cufflinks 11.4622 0.0 30.6246    
cufflinks 13.0494 0.0 34.8146    
cufflinks 20.7945 0.0 56.0243 High High
cufflinks 14.4094 0.0 38.4467    
cufflinks 13.7003 0.0 36.5517    
cufflinks 10.975 0.0 29.354   Low
cufflinks 16.3871 0.0 43.8068    
cufflinks 13.9716 0.0 37.2765    
cufflinks 7.887     High  
cufflinks 2.477       Low
cufflinks 8.194     High  
cufflinks 8.105     High  
cufflinks 8.149     High  
cufflinks 2.659       Low
cufflinks 5.495        
cufflinks 3.984        
cufflinks 9.069     High High
cufflinks 9.048     High High
cufflinks 4.506        
cufflinks 3.062       Low
cufflinks 6.169        
cufflinks 7.041        
cufflinks 4.649        
cufflinks 4.643        
cufflinks 5.099        

0 Strain