Gene : Glyma.13G279200 G. max Wm82.a2.v1
Defline:  (1 of 12) PTHR11772//PTHR11772:SF14 - ASPARAGINE SYNTHETASE Genomic Order:  2792
Name:  ? Glyma.13G279200 Secondary Identifier:  ? PAC:30501222
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G279200 0.5kb upstream 0.5kb upstream 2612 true Chr13: 38036185-38038796 Glycine max
Glyma.13G279200 0.5kb upstream 0.5kb upstream 500 false Chr13: 38036185-38036684 Glycine max
Glyma.13G279200 0.5kb downstream 0.5kb downstream 2612 true Chr13: 38036685-38039296 Glycine max
Glyma.13G279200 0.5kb downstream 0.5kb downstream 500 false Chr13: 38038797-38039296 Glycine max
Glyma.13G279200 1.0kb upstream 1.0kb upstream 3112 true Chr13: 38035685-38038796 Glycine max
Glyma.13G279200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 38035685-38036684 Glycine max
Glyma.13G279200 1.0kb downstream 1.0kb downstream 3112 true Chr13: 38036685-38039796 Glycine max
Glyma.13G279200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 38038797-38039796 Glycine max
Glyma.13G279200 2.0kb upstream 2.0kb upstream 4112 true Chr13: 38034685-38038796 Glycine max
Glyma.13G279200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 38034685-38036684 Glycine max
Glyma.13G279200 2.0kb downstream 2.0kb downstream 4112 true Chr13: 38036685-38040796 Glycine max
Glyma.13G279200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 38038797-38040796 Glycine max
Glyma.13G279200 5.0kb upstream 5.0kb upstream 7112 true Chr13: 38031685-38038796 Glycine max
Glyma.13G279200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 38031685-38036684 Glycine max
Glyma.13G279200 5.0kb downstream 5.0kb downstream 7112 true Chr13: 38036685-38043796 Glycine max
Glyma.13G279200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 38038797-38043796 Glycine max
Glyma.13G279200 10.0kb upstream 10.0kb upstream 12112 true Chr13: 38026685-38038796 Glycine max
Glyma.13G279200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 38026685-38036684 Glycine max
Glyma.13G279200 10.0kb downstream 10.0kb downstream 12112 true Chr13: 38036685-38048796 Glycine max
Glyma.13G279200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 38038797-38048796 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304605 5265 Fabidae View MSA
124072477 5270 Rosid View MSA
123746642 5271 Pentapetalae View MSA
122787862 5272 Eudicot View MSA
122046778 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 125.246 0.0 376.454 High High
cufflinks 28.9386 0.0 77.2078 High  
cufflinks 88.2041 0.0 254.091 High High
cufflinks 12.5211 0.0 34.5072   Low
cufflinks 18.5328 0.0 49.9247    
cufflinks 33.589 0.0 89.7552 High  
cufflinks 15.6116 0.0 42.4149    
cufflinks 18.8383 0.0 50.6358    
cufflinks 37.7088 0.0 101.089 High  
cufflinks 5.329       Low
cufflinks 682.29     High High
cufflinks 27.328     High  
cufflinks 4.647       Low
cufflinks 10.197     High Low
cufflinks 342.836     High High
cufflinks 89.94     High  
cufflinks 20.852     High  
cufflinks 7.353     High Low
cufflinks 24.116     High  
cufflinks 115.956     High  
cufflinks 754.054     High High
cufflinks 77.016     High  
cufflinks 21.955     High  
cufflinks 455.725     High High
cufflinks 87.123     High  
cufflinks 271.594     High  

0 Strain