Gene : Glyma.13G280300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23410 - RIBOSOMAL PROTEIN L5-RELATED Genomic Order:  2803
Name:  ? Glyma.13G280300 Secondary Identifier:  ? PAC:30500861
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G280300 0.5kb upstream 0.5kb upstream 3427 true Chr13: 38167832-38171258 Glycine max
Glyma.13G280300 0.5kb upstream 0.5kb upstream 500 false Chr13: 38170759-38171258 Glycine max
Glyma.13G280300 0.5kb downstream 0.5kb downstream 3427 true Chr13: 38167332-38170758 Glycine max
Glyma.13G280300 0.5kb downstream 0.5kb downstream 500 false Chr13: 38167332-38167831 Glycine max
Glyma.13G280300 1.0kb upstream 1.0kb upstream 3927 true Chr13: 38167832-38171758 Glycine max
Glyma.13G280300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 38170759-38171758 Glycine max
Glyma.13G280300 1.0kb downstream 1.0kb downstream 3927 true Chr13: 38166832-38170758 Glycine max
Glyma.13G280300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 38166832-38167831 Glycine max
Glyma.13G280300 2.0kb upstream 2.0kb upstream 4927 true Chr13: 38167832-38172758 Glycine max
Glyma.13G280300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 38170759-38172758 Glycine max
Glyma.13G280300 2.0kb downstream 2.0kb downstream 4927 true Chr13: 38165832-38170758 Glycine max
Glyma.13G280300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 38165832-38167831 Glycine max
Glyma.13G280300 5.0kb upstream 5.0kb upstream 7927 true Chr13: 38167832-38175758 Glycine max
Glyma.13G280300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 38170759-38175758 Glycine max
Glyma.13G280300 5.0kb downstream 5.0kb downstream 7927 true Chr13: 38162832-38170758 Glycine max
Glyma.13G280300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 38162832-38167831 Glycine max
Glyma.13G280300 10.0kb upstream 10.0kb upstream 12927 true Chr13: 38167832-38180758 Glycine max
Glyma.13G280300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 38170759-38180758 Glycine max
Glyma.13G280300 10.0kb downstream 10.0kb downstream 12927 true Chr13: 38157832-38170758 Glycine max
Glyma.13G280300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 38157832-38167831 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312221 5265 Fabidae View MSA
124061233 5270 Rosid View MSA
123751479 5271 Pentapetalae View MSA
122787634 5272 Eudicot View MSA
122045073 5273 Angiosperm View MSA
121347703 5274 Embryophyte View MSA
123424766 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 117.009 0.0 362.21 High  
cufflinks 117.305 0.0 363.626 High  
cufflinks 64.2232 0.0 182.916 High Low
cufflinks 106.005 0.0 323.641 High  
cufflinks 202.955 0.0 704.369 High High
cufflinks 126.71 0.0 397.803 High  
cufflinks 211.671 0.0 741.869 High High
cufflinks 115.725 0.0 358.281 High  
cufflinks 123.069 0.0 385.008 High  
cufflinks 27.768     High  
cufflinks 6.942     High Low
cufflinks 19.363     High  
cufflinks 59.657     High High
cufflinks 83.912     High High
cufflinks 7.523     High Low
cufflinks 19.596     High  
cufflinks 15.847     High  
cufflinks 21.658     High  
cufflinks 28.12     High  
cufflinks 16.227     High  
cufflinks 11.452     High  
cufflinks 16.19     High  
cufflinks 25.069     High  
cufflinks 9.732     High Low
cufflinks 19.089     High  
cufflinks 12.865     High  

0 Strain