Gene : Glyma.13G269600 G. max Wm82.a2.v1
Defline:  (1 of 22) PTHR16517 - TUBBY-RELATED Genomic Order:  2696
Name:  ? Glyma.13G269600 Secondary Identifier:  ? PAC:30501032
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G269600 0.5kb upstream 0.5kb upstream 4828 true Chr13: 37172357-37177184 Glycine max
Glyma.13G269600 0.5kb upstream 0.5kb upstream 500 false Chr13: 37172357-37172856 Glycine max
Glyma.13G269600 0.5kb downstream 0.5kb downstream 4828 true Chr13: 37172857-37177684 Glycine max
Glyma.13G269600 0.5kb downstream 0.5kb downstream 500 false Chr13: 37177185-37177684 Glycine max
Glyma.13G269600 1.0kb upstream 1.0kb upstream 5328 true Chr13: 37171857-37177184 Glycine max
Glyma.13G269600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 37171857-37172856 Glycine max
Glyma.13G269600 1.0kb downstream 1.0kb downstream 5328 true Chr13: 37172857-37178184 Glycine max
Glyma.13G269600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 37177185-37178184 Glycine max
Glyma.13G269600 2.0kb upstream 2.0kb upstream 6328 true Chr13: 37170857-37177184 Glycine max
Glyma.13G269600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 37170857-37172856 Glycine max
Glyma.13G269600 2.0kb downstream 2.0kb downstream 6328 true Chr13: 37172857-37179184 Glycine max
Glyma.13G269600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 37177185-37179184 Glycine max
Glyma.13G269600 5.0kb upstream 5.0kb upstream 9328 true Chr13: 37167857-37177184 Glycine max
Glyma.13G269600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 37167857-37172856 Glycine max
Glyma.13G269600 5.0kb downstream 5.0kb downstream 9328 true Chr13: 37172857-37182184 Glycine max
Glyma.13G269600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 37177185-37182184 Glycine max
Glyma.13G269600 10.0kb upstream 10.0kb upstream 14328 true Chr13: 37162857-37177184 Glycine max
Glyma.13G269600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 37162857-37172856 Glycine max
Glyma.13G269600 10.0kb downstream 10.0kb downstream 14328 true Chr13: 37172857-37187184 Glycine max
Glyma.13G269600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 37177185-37187184 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308151 5265 Fabidae View MSA
124061146 5270 Rosid View MSA
123740168 5271 Pentapetalae View MSA
122785762 5272 Eudicot View MSA
122045291 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121310429 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.1818 0.0 43.3636    
cufflinks 15.7459 0.0 42.2668   Low
cufflinks 21.5203 0.0 57.418 High High
cufflinks 19.2483 0.0 51.4014    
cufflinks 17.0824 0.0 45.6723    
cufflinks 22.0724 0.0 58.8876   High
cufflinks 15.1788 0.0 40.7292   Low
cufflinks 21.324 0.0 56.8915 High High
cufflinks 17.1985 0.0 45.9991    
cufflinks 4.512        
cufflinks 7.94     High High
cufflinks 4.781        
cufflinks 3.402       Low
cufflinks 2.793       Low
cufflinks 10.738     High High
cufflinks 5.357        
cufflinks 5.122        
cufflinks 5.015        
cufflinks 5.191        
cufflinks 6.153        
cufflinks 6.67     High  
cufflinks 5.762        
cufflinks 4.84        
cufflinks 7.157     High  
cufflinks 5.321        
cufflinks 5.142        

0 Strain