Gene : Glyma.13G271900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33388:SF1 - F1K23.3 Genomic Order:  2719
Name:  ? Glyma.13G271900 Secondary Identifier:  ? PAC:30501521
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G271900 0.5kb upstream 0.5kb upstream 4056 true Chr13: 37390052-37394107 Glycine max
Glyma.13G271900 0.5kb upstream 0.5kb upstream 500 false Chr13: 37390052-37390551 Glycine max
Glyma.13G271900 0.5kb downstream 0.5kb downstream 4056 true Chr13: 37390552-37394607 Glycine max
Glyma.13G271900 0.5kb downstream 0.5kb downstream 500 false Chr13: 37394108-37394607 Glycine max
Glyma.13G271900 1.0kb upstream 1.0kb upstream 4556 true Chr13: 37389552-37394107 Glycine max
Glyma.13G271900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 37389552-37390551 Glycine max
Glyma.13G271900 1.0kb downstream 1.0kb downstream 4556 true Chr13: 37390552-37395107 Glycine max
Glyma.13G271900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 37394108-37395107 Glycine max
Glyma.13G271900 2.0kb upstream 2.0kb upstream 5556 true Chr13: 37388552-37394107 Glycine max
Glyma.13G271900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 37388552-37390551 Glycine max
Glyma.13G271900 2.0kb downstream 2.0kb downstream 5556 true Chr13: 37390552-37396107 Glycine max
Glyma.13G271900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 37394108-37396107 Glycine max
Glyma.13G271900 5.0kb upstream 5.0kb upstream 8556 true Chr13: 37385552-37394107 Glycine max
Glyma.13G271900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 37385552-37390551 Glycine max
Glyma.13G271900 5.0kb downstream 5.0kb downstream 8556 true Chr13: 37390552-37399107 Glycine max
Glyma.13G271900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 37394108-37399107 Glycine max
Glyma.13G271900 10.0kb upstream 10.0kb upstream 13556 true Chr13: 37380552-37394107 Glycine max
Glyma.13G271900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 37380552-37390551 Glycine max
Glyma.13G271900 10.0kb downstream 10.0kb downstream 13556 true Chr13: 37390552-37404107 Glycine max
Glyma.13G271900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 37394108-37404107 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308261 5265 Fabidae View MSA
124072979 5270 Rosid View MSA
123749696 5271 Pentapetalae View MSA
122794097 5272 Eudicot View MSA
122049695 5273 Angiosperm View MSA
121311547 5274 Embryophyte View MSA
123348830 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.983838 0.0 6.23949    
cufflinks 0.716142 0.0 4.53438    
cufflinks 0.720867 0.0 4.08568    
cufflinks 1.36375 0.0 6.84931   High
cufflinks 0.510275 0.0 3.17906    
cufflinks 0.480442 0.0 2.21136    
cufflinks 1.40323 0.0 7.53221   High
cufflinks 0.552842 0.0 3.34456    
cufflinks 0.42285 0.0 2.02042   Low
cufflinks 0.085     Low  
cufflinks 0.028     Low Low
cufflinks 0.493        
cufflinks 0.234        
cufflinks 0.408        
cufflinks 0.085        
cufflinks 0.99        
cufflinks 0.03     Low Low
cufflinks 2.623       High
cufflinks 0.399        
cufflinks 1.836       High
cufflinks 0.026     Low Low
cufflinks 1.343       High
cufflinks 1.418       High
cufflinks 0.052     Low  
cufflinks 1.221        
cufflinks 0.032     Low Low

0 Strain