Gene : Glyma.13G272500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR13301:SF69 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  2725
Name:  ? Glyma.13G272500 Secondary Identifier:  ? PAC:30505716
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G272500 0.5kb upstream 0.5kb upstream 4162 true Chr13: 37446151-37450312 Glycine max
Glyma.13G272500 0.5kb upstream 0.5kb upstream 500 false Chr13: 37449813-37450312 Glycine max
Glyma.13G272500 0.5kb downstream 0.5kb downstream 4162 true Chr13: 37445651-37449812 Glycine max
Glyma.13G272500 0.5kb downstream 0.5kb downstream 500 false Chr13: 37445651-37446150 Glycine max
Glyma.13G272500 1.0kb upstream 1.0kb upstream 4662 true Chr13: 37446151-37450812 Glycine max
Glyma.13G272500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 37449813-37450812 Glycine max
Glyma.13G272500 1.0kb downstream 1.0kb downstream 4662 true Chr13: 37445151-37449812 Glycine max
Glyma.13G272500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 37445151-37446150 Glycine max
Glyma.13G272500 2.0kb upstream 2.0kb upstream 5662 true Chr13: 37446151-37451812 Glycine max
Glyma.13G272500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 37449813-37451812 Glycine max
Glyma.13G272500 2.0kb downstream 2.0kb downstream 5662 true Chr13: 37444151-37449812 Glycine max
Glyma.13G272500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 37444151-37446150 Glycine max
Glyma.13G272500 5.0kb upstream 5.0kb upstream 8662 true Chr13: 37446151-37454812 Glycine max
Glyma.13G272500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 37449813-37454812 Glycine max
Glyma.13G272500 5.0kb downstream 5.0kb downstream 8662 true Chr13: 37441151-37449812 Glycine max
Glyma.13G272500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 37441151-37446150 Glycine max
Glyma.13G272500 10.0kb upstream 10.0kb upstream 13662 true Chr13: 37446151-37459812 Glycine max
Glyma.13G272500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 37449813-37459812 Glycine max
Glyma.13G272500 10.0kb downstream 10.0kb downstream 13662 true Chr13: 37436151-37449812 Glycine max
Glyma.13G272500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 37436151-37446150 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311969 5265 Fabidae View MSA
124069562 5270 Rosid View MSA
123743912 5271 Pentapetalae View MSA
122795222 5272 Eudicot View MSA
122050471 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350837 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.18532 0.0 0.929831 Low Low
cufflinks 2.41103 0.0 8.06665    
cufflinks 0.580761 0.0 2.60861    
cufflinks 0.943141 0.0 5.25046    
cufflinks 16.3839 0.0 56.0492   High
cufflinks 5.67541 0.0 19.0836    
cufflinks 0.316584 0.0 1.55922   Low
cufflinks 1.18173 0.0 4.77604    
cufflinks 6.95646 0.0 26.0752    
cufflinks 2.951       High
cufflinks 0.301       Low
cufflinks 1.013        
cufflinks 5.131       High
cufflinks 9.036     High High
cufflinks 0.592        
cufflinks 0.717        
cufflinks 0.709        
cufflinks 4.935       High
cufflinks 0.282       Low
cufflinks 0.451        
cufflinks 0.773        
cufflinks 0.551        
cufflinks 1.297        
cufflinks 0.19       Low
cufflinks 0.544        
cufflinks 1.523        

0 Strain