Gene : Glyma.13G274000 G. max Wm82.a2.v1
Defline:  (1 of 18) KOG3399 - Predicted Yippee-type zinc-binding protein Genomic Order:  2740
Name:  ? Glyma.13G274000 Secondary Identifier:  ? PAC:30502160
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G274000 0.5kb upstream 0.5kb upstream 4011 true Chr13: 37542937-37546947 Glycine max
Glyma.13G274000 0.5kb upstream 0.5kb upstream 500 false Chr13: 37546448-37546947 Glycine max
Glyma.13G274000 0.5kb downstream 0.5kb downstream 4011 true Chr13: 37542437-37546447 Glycine max
Glyma.13G274000 0.5kb downstream 0.5kb downstream 500 false Chr13: 37542437-37542936 Glycine max
Glyma.13G274000 1.0kb upstream 1.0kb upstream 4511 true Chr13: 37542937-37547447 Glycine max
Glyma.13G274000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 37546448-37547447 Glycine max
Glyma.13G274000 1.0kb downstream 1.0kb downstream 4511 true Chr13: 37541937-37546447 Glycine max
Glyma.13G274000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 37541937-37542936 Glycine max
Glyma.13G274000 2.0kb upstream 2.0kb upstream 5511 true Chr13: 37542937-37548447 Glycine max
Glyma.13G274000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 37546448-37548447 Glycine max
Glyma.13G274000 2.0kb downstream 2.0kb downstream 5511 true Chr13: 37540937-37546447 Glycine max
Glyma.13G274000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 37540937-37542936 Glycine max
Glyma.13G274000 5.0kb upstream 5.0kb upstream 8511 true Chr13: 37542937-37551447 Glycine max
Glyma.13G274000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 37546448-37551447 Glycine max
Glyma.13G274000 5.0kb downstream 5.0kb downstream 8511 true Chr13: 37537937-37546447 Glycine max
Glyma.13G274000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 37537937-37542936 Glycine max
Glyma.13G274000 10.0kb upstream 10.0kb upstream 13511 true Chr13: 37542937-37556447 Glycine max
Glyma.13G274000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 37546448-37556447 Glycine max
Glyma.13G274000 10.0kb downstream 10.0kb downstream 13511 true Chr13: 37532937-37546447 Glycine max
Glyma.13G274000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 37532937-37542936 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041250 5273 Angiosperm View MSA
122304955 5265 Fabidae View MSA
124066251 5270 Rosid View MSA
123749273 5271 Pentapetalae View MSA
122792066 5272 Eudicot View MSA
123428914 5275 Viridiplantae View MSA
121350900 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.85946 0.0 16.2023    
cufflinks 9.39313 0.0 28.5693    
cufflinks 4.14 0.0 14.0178    
cufflinks 16.4059 0.0 46.3443   High
cufflinks 7.62624 0.0 23.8857    
cufflinks 4.39147 0.0 14.807    
cufflinks 28.6978 0.0 77.6279 High High
cufflinks 8.07668 0.0 25.051    
cufflinks 4.1655 0.0 14.1389    
cufflinks 1.915       High
cufflinks 0.606        
cufflinks 1.392        
cufflinks 0.584        
cufflinks 0.522        
cufflinks 1.084        
cufflinks 0.971        
cufflinks 0.292       Low
cufflinks 3.02       High
cufflinks 1.465        
cufflinks 1.078        
cufflinks 0.709        
cufflinks 0.939        
cufflinks 1.318        
cufflinks 0.293       Low
cufflinks 1.409        
cufflinks 0.519        

0 Strain