Gene : Glyma.13G262200 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.5.1.30 - Heptaprenyl diphosphate synthase / Trans-hexaprenyltranstransferase Genomic Order:  2622
Name:  ? Glyma.13G262200 Secondary Identifier:  ? PAC:30502485
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax HEXPPSYN-PWY Glycine max pathologic  
Gmax PWY-5120 Glycine max pathologic  
Gmax PWY-5783 Glycine max pathologic  
Gmax PWY-5805 Glycine max pathologic  
Gmax PWY-5807 Glycine max pathologic  
Gmax PWY-5910 Glycine max pathologic  
Gmax PWY-6520 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G262200 0.5kb upstream 0.5kb upstream 5018 true Chr13: 36591312-36596329 Glycine max
Glyma.13G262200 0.5kb upstream 0.5kb upstream 500 false Chr13: 36595830-36596329 Glycine max
Glyma.13G262200 0.5kb downstream 0.5kb downstream 5018 true Chr13: 36590812-36595829 Glycine max
Glyma.13G262200 0.5kb downstream 0.5kb downstream 500 false Chr13: 36590812-36591311 Glycine max
Glyma.13G262200 1.0kb upstream 1.0kb upstream 5518 true Chr13: 36591312-36596829 Glycine max
Glyma.13G262200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 36595830-36596829 Glycine max
Glyma.13G262200 1.0kb downstream 1.0kb downstream 5518 true Chr13: 36590312-36595829 Glycine max
Glyma.13G262200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 36590312-36591311 Glycine max
Glyma.13G262200 2.0kb upstream 2.0kb upstream 6518 true Chr13: 36591312-36597829 Glycine max
Glyma.13G262200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 36595830-36597829 Glycine max
Glyma.13G262200 2.0kb downstream 2.0kb downstream 6518 true Chr13: 36589312-36595829 Glycine max
Glyma.13G262200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 36589312-36591311 Glycine max
Glyma.13G262200 5.0kb upstream 5.0kb upstream 9518 true Chr13: 36591312-36600829 Glycine max
Glyma.13G262200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 36595830-36600829 Glycine max
Glyma.13G262200 5.0kb downstream 5.0kb downstream 9518 true Chr13: 36586312-36595829 Glycine max
Glyma.13G262200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 36586312-36591311 Glycine max
Glyma.13G262200 10.0kb upstream 10.0kb upstream 14518 true Chr13: 36591312-36605829 Glycine max
Glyma.13G262200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 36595830-36605829 Glycine max
Glyma.13G262200 10.0kb downstream 10.0kb downstream 14518 true Chr13: 36581312-36595829 Glycine max
Glyma.13G262200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 36581312-36591311 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041065 5273 Angiosperm View MSA
122299175 5265 Fabidae View MSA
124065347 5270 Rosid View MSA
123746184 5271 Pentapetalae View MSA
122791358 5272 Eudicot View MSA
121345449 5274 Embryophyte View MSA
123424009 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 88.026 0.0 392.037 High High
cufflinks 6.13563 0.0 19.7077    
cufflinks 8.26275 0.0 29.465    
cufflinks 7.02301 0.0 26.2021    
cufflinks 2.07579 0.0 6.98547    
cufflinks 2.29943 0.0 9.64145    
cufflinks 3.55691 0.0 13.1364    
cufflinks 4.97952 0.0 16.7178    
cufflinks 1.99469 0.0 6.73732    
cufflinks 1.248        
cufflinks 0.146       Low
cufflinks 3.234        
cufflinks 0.838        
cufflinks 0.366        
cufflinks 0.432        
cufflinks 4.319       High
cufflinks 0.262       Low
cufflinks 1.497        
cufflinks 1.822        
cufflinks 3.611       High
cufflinks 0.393        
cufflinks 4.671       High
cufflinks 3.604       High
cufflinks 0.242       Low
cufflinks 4.641       High
cufflinks 0.311        

0 Strain