Gene : Glyma.13G264100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23198:SF4 - NUCLEOPORIN AUTOPEPTIDASE Genomic Order:  2641
Name:  ? Glyma.13G264100 Secondary Identifier:  ? PAC:30506067
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G264100 0.5kb upstream 0.5kb upstream 8234 true Chr13: 36711934-36720167 Glycine max
Glyma.13G264100 0.5kb upstream 0.5kb upstream 500 false Chr13: 36719668-36720167 Glycine max
Glyma.13G264100 0.5kb downstream 0.5kb downstream 8234 true Chr13: 36711434-36719667 Glycine max
Glyma.13G264100 0.5kb downstream 0.5kb downstream 500 false Chr13: 36711434-36711933 Glycine max
Glyma.13G264100 1.0kb upstream 1.0kb upstream 8734 true Chr13: 36711934-36720667 Glycine max
Glyma.13G264100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 36719668-36720667 Glycine max
Glyma.13G264100 1.0kb downstream 1.0kb downstream 8734 true Chr13: 36710934-36719667 Glycine max
Glyma.13G264100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 36710934-36711933 Glycine max
Glyma.13G264100 2.0kb upstream 2.0kb upstream 9734 true Chr13: 36711934-36721667 Glycine max
Glyma.13G264100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 36719668-36721667 Glycine max
Glyma.13G264100 2.0kb downstream 2.0kb downstream 9734 true Chr13: 36709934-36719667 Glycine max
Glyma.13G264100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 36709934-36711933 Glycine max
Glyma.13G264100 5.0kb upstream 5.0kb upstream 12734 true Chr13: 36711934-36724667 Glycine max
Glyma.13G264100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 36719668-36724667 Glycine max
Glyma.13G264100 5.0kb downstream 5.0kb downstream 12734 true Chr13: 36706934-36719667 Glycine max
Glyma.13G264100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 36706934-36711933 Glycine max
Glyma.13G264100 10.0kb upstream 10.0kb upstream 17734 true Chr13: 36711934-36729667 Glycine max
Glyma.13G264100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 36719668-36729667 Glycine max
Glyma.13G264100 10.0kb downstream 10.0kb downstream 17734 true Chr13: 36701934-36719667 Glycine max
Glyma.13G264100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 36701934-36711933 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307700 5265 Fabidae View MSA
124061864 5270 Rosid View MSA
123748776 5271 Pentapetalae View MSA
122797875 5272 Eudicot View MSA
122041710 5273 Angiosperm View MSA
121349617 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.4596 0.0 50.9309    
cufflinks 15.9565 0.0 43.4937    
cufflinks 20.6239 0.0 57.4648 High High
cufflinks 17.26 0.0 47.3736    
cufflinks 18.4617 0.0 51.0007    
cufflinks 12.9816 0.0 35.0079   Low
cufflinks 21.7973 0.0 61.1201 High High
cufflinks 13.7551 0.0 37.2021   Low
cufflinks 16.0224 0.0 43.7341    
cufflinks 7.422       Low
cufflinks 22.721     High High
cufflinks 9.592     High  
cufflinks 8.328     High  
cufflinks 8.536     High  
cufflinks 21.927     High High
cufflinks 11.3     High  
cufflinks 8.548     High  
cufflinks 8.854     High  
cufflinks 10.273     High  
cufflinks 13.842     High  
cufflinks 13.771     High  
cufflinks 11.805     High  
cufflinks 7.701     High Low
cufflinks 14.381     High  
cufflinks 12.094     High  
cufflinks 10.622     High  

0 Strain