Gene : Glyma.13G265500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR32285:SF30 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 42 Genomic Order:  2655
Name:  ? Glyma.13G265500 Secondary Identifier:  ? PAC:30504744
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G265500 0.5kb upstream 0.5kb upstream 3568 true Chr13: 36837286-36840853 Glycine max
Glyma.13G265500 0.5kb upstream 0.5kb upstream 500 false Chr13: 36840354-36840853 Glycine max
Glyma.13G265500 0.5kb downstream 0.5kb downstream 3568 true Chr13: 36836786-36840353 Glycine max
Glyma.13G265500 0.5kb downstream 0.5kb downstream 500 false Chr13: 36836786-36837285 Glycine max
Glyma.13G265500 1.0kb upstream 1.0kb upstream 4068 true Chr13: 36837286-36841353 Glycine max
Glyma.13G265500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 36840354-36841353 Glycine max
Glyma.13G265500 1.0kb downstream 1.0kb downstream 4068 true Chr13: 36836286-36840353 Glycine max
Glyma.13G265500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 36836286-36837285 Glycine max
Glyma.13G265500 2.0kb upstream 2.0kb upstream 5068 true Chr13: 36837286-36842353 Glycine max
Glyma.13G265500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 36840354-36842353 Glycine max
Glyma.13G265500 2.0kb downstream 2.0kb downstream 5068 true Chr13: 36835286-36840353 Glycine max
Glyma.13G265500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 36835286-36837285 Glycine max
Glyma.13G265500 5.0kb upstream 5.0kb upstream 8068 true Chr13: 36837286-36845353 Glycine max
Glyma.13G265500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 36840354-36845353 Glycine max
Glyma.13G265500 5.0kb downstream 5.0kb downstream 8068 true Chr13: 36832286-36840353 Glycine max
Glyma.13G265500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 36832286-36837285 Glycine max
Glyma.13G265500 10.0kb upstream 10.0kb upstream 13068 true Chr13: 36837286-36850353 Glycine max
Glyma.13G265500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 36840354-36850353 Glycine max
Glyma.13G265500 10.0kb downstream 10.0kb downstream 13068 true Chr13: 36827286-36840353 Glycine max
Glyma.13G265500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 36827286-36837285 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312045 5265 Fabidae View MSA
124063024 5270 Rosid View MSA
123753462 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.391438 0.0 1.48866    
cufflinks 4.14052 0.0 12.9323   High
cufflinks 0.129445 0.0 0.51372 Low Low
cufflinks 0.482323 0.0 1.81558    
cufflinks 0.579598 0.0 2.16676    
cufflinks 0.948591 0.0 3.45043    
cufflinks 1.55631 0.0 5.47165    
cufflinks 1.026 0.0 3.71345    
cufflinks 1.0039 0.0 3.63976    
cufflinks 0.118        
cufflinks 0.036     Low Low
cufflinks 0.188        
cufflinks 0.41        
cufflinks 0.191        
cufflinks 0.067       Low
cufflinks 1.535       High
cufflinks 0.551        
cufflinks 0.111     Low  
cufflinks 3.761       High
cufflinks 0.53        
cufflinks 0.175        
cufflinks 1.145        
cufflinks 2.225       High
cufflinks 0.132        
cufflinks 0.734        
cufflinks 0.167        

0 Strain