Gene : Glyma.13G315000 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Genomic Order:  3150
Name:  ? Glyma.13G315000 Secondary Identifier:  ? PAC:30503833
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G315000 0.5kb upstream 0.5kb upstream 1742 true Chr13: 41028031-41029772 Glycine max
Glyma.13G315000 0.5kb upstream 0.5kb upstream 500 false Chr13: 41029273-41029772 Glycine max
Glyma.13G315000 0.5kb downstream 0.5kb downstream 1742 true Chr13: 41027531-41029272 Glycine max
Glyma.13G315000 0.5kb downstream 0.5kb downstream 500 false Chr13: 41027531-41028030 Glycine max
Glyma.13G315000 1.0kb upstream 1.0kb upstream 2242 true Chr13: 41028031-41030272 Glycine max
Glyma.13G315000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 41029273-41030272 Glycine max
Glyma.13G315000 1.0kb downstream 1.0kb downstream 2242 true Chr13: 41027031-41029272 Glycine max
Glyma.13G315000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 41027031-41028030 Glycine max
Glyma.13G315000 2.0kb upstream 2.0kb upstream 3242 true Chr13: 41028031-41031272 Glycine max
Glyma.13G315000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 41029273-41031272 Glycine max
Glyma.13G315000 2.0kb downstream 2.0kb downstream 3242 true Chr13: 41026031-41029272 Glycine max
Glyma.13G315000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 41026031-41028030 Glycine max
Glyma.13G315000 5.0kb upstream 5.0kb upstream 6242 true Chr13: 41028031-41034272 Glycine max
Glyma.13G315000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 41029273-41034272 Glycine max
Glyma.13G315000 5.0kb downstream 5.0kb downstream 6242 true Chr13: 41023031-41029272 Glycine max
Glyma.13G315000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 41023031-41028030 Glycine max
Glyma.13G315000 10.0kb upstream 10.0kb upstream 11242 true Chr13: 41028031-41039272 Glycine max
Glyma.13G315000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 41029273-41039272 Glycine max
Glyma.13G315000 10.0kb downstream 10.0kb downstream 11242 true Chr13: 41018031-41029272 Glycine max
Glyma.13G315000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 41018031-41028030 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301140 5265 Fabidae View MSA
124067511 5270 Rosid View MSA
123750360 5271 Pentapetalae View MSA
122793226 5272 Eudicot View MSA
122046070 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0253102 0.0 0.114782 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.85787 0.0 12.8019    
cufflinks 4.54276 0.0 14.7697    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.73038 0.0 28.4297    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.203        
cufflinks 0.013     Low Low
cufflinks 11.522     High High
cufflinks 0.874        
cufflinks 0.061        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.551        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low Low
cufflinks 1.584        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.172        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.549        

0 Strain