Gene : Glyma.13G315800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23088:SF26 - N-CARBAMOYLPUTRESCINE AMIDASE Genomic Order:  3158
Name:  ? Glyma.13G315800 Secondary Identifier:  ? PAC:30501204
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax POLYAMINSYN3-PWY Glycine max pathologic  
Gmax PWY-43 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G315800 0.5kb upstream 0.5kb upstream 4333 true Chr13: 41066446-41070778 Glycine max
Glyma.13G315800 0.5kb upstream 0.5kb upstream 500 false Chr13: 41066446-41066945 Glycine max
Glyma.13G315800 0.5kb downstream 0.5kb downstream 4333 true Chr13: 41066946-41071278 Glycine max
Glyma.13G315800 0.5kb downstream 0.5kb downstream 500 false Chr13: 41070779-41071278 Glycine max
Glyma.13G315800 1.0kb upstream 1.0kb upstream 4833 true Chr13: 41065946-41070778 Glycine max
Glyma.13G315800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 41065946-41066945 Glycine max
Glyma.13G315800 1.0kb downstream 1.0kb downstream 4833 true Chr13: 41066946-41071778 Glycine max
Glyma.13G315800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 41070779-41071778 Glycine max
Glyma.13G315800 2.0kb upstream 2.0kb upstream 5833 true Chr13: 41064946-41070778 Glycine max
Glyma.13G315800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 41064946-41066945 Glycine max
Glyma.13G315800 2.0kb downstream 2.0kb downstream 5833 true Chr13: 41066946-41072778 Glycine max
Glyma.13G315800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 41070779-41072778 Glycine max
Glyma.13G315800 5.0kb upstream 5.0kb upstream 8833 true Chr13: 41061946-41070778 Glycine max
Glyma.13G315800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 41061946-41066945 Glycine max
Glyma.13G315800 5.0kb downstream 5.0kb downstream 8833 true Chr13: 41066946-41075778 Glycine max
Glyma.13G315800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 41070779-41075778 Glycine max
Glyma.13G315800 10.0kb upstream 10.0kb upstream 13833 true Chr13: 41056946-41070778 Glycine max
Glyma.13G315800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 41056946-41066945 Glycine max
Glyma.13G315800 10.0kb downstream 10.0kb downstream 13833 true Chr13: 41066946-41080778 Glycine max
Glyma.13G315800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 41070779-41080778 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303763 5265 Fabidae View MSA
124064750 5270 Rosid View MSA
123740883 5271 Pentapetalae View MSA
122790210 5272 Eudicot View MSA
122048045 5273 Angiosperm View MSA
121345187 5274 Embryophyte View MSA
123425412 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.67317 0.0 26.84    
cufflinks 7.25959 0.0 20.7427   Low
cufflinks 14.268 0.0 38.4618   High
cufflinks 6.61447 0.0 19.0951   Low
cufflinks 13.043 0.0 35.426   High
cufflinks 12.8117 0.0 34.815    
cufflinks 7.83172 0.0 22.2147    
cufflinks 10.1217 0.0 27.9712    
cufflinks 10.5038 0.0 28.9415    
cufflinks 3.046        
cufflinks 1.404        
cufflinks 3.732        
cufflinks 6.586       High
cufflinks 7.491     High High
cufflinks 1.233       Low
cufflinks 1.665        
cufflinks 3.075        
cufflinks 3.706        
cufflinks 2.478        
cufflinks 1.482        
cufflinks 2.197        
cufflinks 1.541        
cufflinks 1.797        
cufflinks 1.505        
cufflinks 1.7        
cufflinks 2.367        

0 Strain