Gene : Glyma.13G315900 G. max Wm82.a2.v1
Defline:  (1 of 24) PF11250 - Fantastic Four meristem regulator (FAF) Genomic Order:  3159
Name:  ? Glyma.13G315900 Secondary Identifier:  ? PAC:30500939
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G315900 0.5kb upstream 0.5kb upstream 1548 true Chr13: 41074147-41075694 Glycine max
Glyma.13G315900 0.5kb upstream 0.5kb upstream 500 false Chr13: 41075195-41075694 Glycine max
Glyma.13G315900 0.5kb downstream 0.5kb downstream 1548 true Chr13: 41073647-41075194 Glycine max
Glyma.13G315900 0.5kb downstream 0.5kb downstream 500 false Chr13: 41073647-41074146 Glycine max
Glyma.13G315900 1.0kb upstream 1.0kb upstream 2048 true Chr13: 41074147-41076194 Glycine max
Glyma.13G315900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 41075195-41076194 Glycine max
Glyma.13G315900 1.0kb downstream 1.0kb downstream 2048 true Chr13: 41073147-41075194 Glycine max
Glyma.13G315900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 41073147-41074146 Glycine max
Glyma.13G315900 2.0kb upstream 2.0kb upstream 3048 true Chr13: 41074147-41077194 Glycine max
Glyma.13G315900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 41075195-41077194 Glycine max
Glyma.13G315900 2.0kb downstream 2.0kb downstream 3048 true Chr13: 41072147-41075194 Glycine max
Glyma.13G315900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 41072147-41074146 Glycine max
Glyma.13G315900 5.0kb upstream 5.0kb upstream 6048 true Chr13: 41074147-41080194 Glycine max
Glyma.13G315900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 41075195-41080194 Glycine max
Glyma.13G315900 5.0kb downstream 5.0kb downstream 6048 true Chr13: 41069147-41075194 Glycine max
Glyma.13G315900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 41069147-41074146 Glycine max
Glyma.13G315900 10.0kb upstream 10.0kb upstream 11048 true Chr13: 41074147-41085194 Glycine max
Glyma.13G315900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 41075195-41085194 Glycine max
Glyma.13G315900 10.0kb downstream 10.0kb downstream 11048 true Chr13: 41064147-41075194 Glycine max
Glyma.13G315900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 41064147-41074146 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309919 5265 Fabidae View MSA
124069598 5270 Rosid View MSA
123752468 5271 Pentapetalae View MSA
122797002 5272 Eudicot View MSA
122048900 5273 Angiosperm View MSA
121311160 5274 Embryophyte View MSA
123348494 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0333 0.0 30.7559   High
cufflinks 0.806992 0.0 2.97467    
cufflinks 0.677895 0.0 2.5161    
cufflinks 0.514224 0.0 1.93566    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.310832 0.0 1.19596    
cufflinks 0.0190619 0.0 0.0862168 Low Low
cufflinks 0.03     Low Low
cufflinks 0.438        
cufflinks 1.021        
cufflinks 0.11        
cufflinks 0.012     Low Low
cufflinks 0.073       Low
cufflinks 10.16     High High
cufflinks 0.401        
cufflinks 1.091        
cufflinks 0.918        
cufflinks 5.688       High
cufflinks 0.301        
cufflinks 8.749     High High
cufflinks 3.608        
cufflinks 0.203        
cufflinks 7.863     High High
cufflinks 0.339        

0 Strain