Gene : Glyma.13G317200 G. max Wm82.a2.v1
Defline:  (1 of 17) PTHR10593//PTHR10593:SF27 - SERINE/THREONINE-PROTEIN KINASE RIO Genomic Order:  3172
Name:  ? Glyma.13G317200 Secondary Identifier:  ? PAC:30502335
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G317200 0.5kb upstream 0.5kb upstream 4128 true Chr13: 41173245-41177372 Glycine max
Glyma.13G317200 0.5kb upstream 0.5kb upstream 500 false Chr13: 41173245-41173744 Glycine max
Glyma.13G317200 0.5kb downstream 0.5kb downstream 4128 true Chr13: 41173745-41177872 Glycine max
Glyma.13G317200 0.5kb downstream 0.5kb downstream 500 false Chr13: 41177373-41177872 Glycine max
Glyma.13G317200 1.0kb upstream 1.0kb upstream 4628 true Chr13: 41172745-41177372 Glycine max
Glyma.13G317200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 41172745-41173744 Glycine max
Glyma.13G317200 1.0kb downstream 1.0kb downstream 4628 true Chr13: 41173745-41178372 Glycine max
Glyma.13G317200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 41177373-41178372 Glycine max
Glyma.13G317200 2.0kb upstream 2.0kb upstream 5628 true Chr13: 41171745-41177372 Glycine max
Glyma.13G317200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 41171745-41173744 Glycine max
Glyma.13G317200 2.0kb downstream 2.0kb downstream 5628 true Chr13: 41173745-41179372 Glycine max
Glyma.13G317200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 41177373-41179372 Glycine max
Glyma.13G317200 5.0kb upstream 5.0kb upstream 8628 true Chr13: 41168745-41177372 Glycine max
Glyma.13G317200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 41168745-41173744 Glycine max
Glyma.13G317200 5.0kb downstream 5.0kb downstream 8628 true Chr13: 41173745-41182372 Glycine max
Glyma.13G317200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 41177373-41182372 Glycine max
Glyma.13G317200 10.0kb upstream 10.0kb upstream 13628 true Chr13: 41163745-41177372 Glycine max
Glyma.13G317200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 41163745-41173744 Glycine max
Glyma.13G317200 10.0kb downstream 10.0kb downstream 13628 true Chr13: 41173745-41187372 Glycine max
Glyma.13G317200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 41177373-41187372 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027572 5273 Angiosperm View MSA
122301122 5265 Fabidae View MSA
124060498 5270 Rosid View MSA
123741647 5271 Pentapetalae View MSA
122787233 5272 Eudicot View MSA
121297208 5274 Embryophyte View MSA
123428588 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.890195 0.0 3.23185    
cufflinks 0.475296 0.0 1.78251    
cufflinks 0.0581661 0.0 0.237566 Low Low
cufflinks 0.320435 0.0 1.22193    
cufflinks 0.314159 0.0 1.20103    
cufflinks 0.0897723 0.0 0.360386 Low Low
cufflinks 0.167762 0.0 0.658124 Low  
cufflinks 4.26471 0.0 13.0007   High
cufflinks 2.63182 0.0 8.62313   High
cufflinks 0.36        
cufflinks 0.473        
cufflinks 0.039     Low Low
cufflinks 0.082     Low  
cufflinks 0.008     Low Low
cufflinks 2.531       High
cufflinks 0.369        
cufflinks 0.072        
cufflinks 0.079     Low  
cufflinks 0.029     Low Low
cufflinks 0.494        
cufflinks 0.175        
cufflinks 0.387        
cufflinks 0.284        
cufflinks 0.615        
cufflinks 0.307        
cufflinks 0.198        

0 Strain