Gene : Glyma.13G320200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22780:SF4 - AP-2 COMPLEX SUBUNIT ALPHA Genomic Order:  3202
Name:  ? Glyma.13G320200 Secondary Identifier:  ? PAC:30502921
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G320200 0.5kb upstream 0.5kb upstream 12105 true Chr13: 41460580-41472684 Glycine max
Glyma.13G320200 0.5kb upstream 0.5kb upstream 500 false Chr13: 41472185-41472684 Glycine max
Glyma.13G320200 0.5kb downstream 0.5kb downstream 12105 true Chr13: 41460080-41472184 Glycine max
Glyma.13G320200 0.5kb downstream 0.5kb downstream 500 false Chr13: 41460080-41460579 Glycine max
Glyma.13G320200 1.0kb upstream 1.0kb upstream 12605 true Chr13: 41460580-41473184 Glycine max
Glyma.13G320200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 41472185-41473184 Glycine max
Glyma.13G320200 1.0kb downstream 1.0kb downstream 12605 true Chr13: 41459580-41472184 Glycine max
Glyma.13G320200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 41459580-41460579 Glycine max
Glyma.13G320200 2.0kb upstream 2.0kb upstream 13605 true Chr13: 41460580-41474184 Glycine max
Glyma.13G320200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 41472185-41474184 Glycine max
Glyma.13G320200 2.0kb downstream 2.0kb downstream 13605 true Chr13: 41458580-41472184 Glycine max
Glyma.13G320200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 41458580-41460579 Glycine max
Glyma.13G320200 5.0kb upstream 5.0kb upstream 16605 true Chr13: 41460580-41477184 Glycine max
Glyma.13G320200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 41472185-41477184 Glycine max
Glyma.13G320200 5.0kb downstream 5.0kb downstream 16605 true Chr13: 41455580-41472184 Glycine max
Glyma.13G320200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 41455580-41460579 Glycine max
Glyma.13G320200 10.0kb upstream 10.0kb upstream 21605 true Chr13: 41460580-41482184 Glycine max
Glyma.13G320200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 41472185-41482184 Glycine max
Glyma.13G320200 10.0kb downstream 10.0kb downstream 21605 true Chr13: 41450580-41472184 Glycine max
Glyma.13G320200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 41450580-41460579 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299920 5265 Fabidae View MSA
124063183 5270 Rosid View MSA
123736751 5271 Pentapetalae View MSA
122792631 5272 Eudicot View MSA
122046006 5273 Angiosperm View MSA
121350469 5274 Embryophyte View MSA
123424291 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.0205 0.0 32.3368    
cufflinks 8.87589 0.0 23.6917   Low
cufflinks 13.453 0.0 36.4309    
cufflinks 11.21 0.0 30.0905    
cufflinks 15.0916 0.0 41.1119   High
cufflinks 13.7166 0.0 37.1574    
cufflinks 9.2755 0.0 24.7661   Low
cufflinks 14.0402 0.0 38.0959    
cufflinks 11.266 0.0 30.2387    
cufflinks 6.565       High
cufflinks 5.776     High  
cufflinks 4.338        
cufflinks 6.561       High
cufflinks 7.02     High High
cufflinks 5.513     High  
cufflinks 4.176        
cufflinks 5.303        
cufflinks 5.128        
cufflinks 4.727        
cufflinks 3.528       Low
cufflinks 6.511     High High
cufflinks 4.033       Low
cufflinks 4.453        
cufflinks 6.249     High  
cufflinks 3.826       Low
cufflinks 6.179        

0 Strain