Gene : Glyma.13G308500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR18966:SF241 - GLUTAMATE RECEPTOR 3.6-RELATED Genomic Order:  3085
Name:  ? Glyma.13G308500 Secondary Identifier:  ? PAC:30505051
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G308500 0.5kb upstream 0.5kb upstream 6260 true Chr13: 40413291-40419550 Glycine max
Glyma.13G308500 0.5kb upstream 0.5kb upstream 500 false Chr13: 40419051-40419550 Glycine max
Glyma.13G308500 0.5kb downstream 0.5kb downstream 6260 true Chr13: 40412791-40419050 Glycine max
Glyma.13G308500 0.5kb downstream 0.5kb downstream 500 false Chr13: 40412791-40413290 Glycine max
Glyma.13G308500 1.0kb upstream 1.0kb upstream 6760 true Chr13: 40413291-40420050 Glycine max
Glyma.13G308500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 40419051-40420050 Glycine max
Glyma.13G308500 1.0kb downstream 1.0kb downstream 6760 true Chr13: 40412291-40419050 Glycine max
Glyma.13G308500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 40412291-40413290 Glycine max
Glyma.13G308500 2.0kb upstream 2.0kb upstream 7760 true Chr13: 40413291-40421050 Glycine max
Glyma.13G308500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 40419051-40421050 Glycine max
Glyma.13G308500 2.0kb downstream 2.0kb downstream 7760 true Chr13: 40411291-40419050 Glycine max
Glyma.13G308500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 40411291-40413290 Glycine max
Glyma.13G308500 5.0kb upstream 5.0kb upstream 10760 true Chr13: 40413291-40424050 Glycine max
Glyma.13G308500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 40419051-40424050 Glycine max
Glyma.13G308500 5.0kb downstream 5.0kb downstream 10760 true Chr13: 40408291-40419050 Glycine max
Glyma.13G308500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 40408291-40413290 Glycine max
Glyma.13G308500 10.0kb upstream 10.0kb upstream 15760 true Chr13: 40413291-40429050 Glycine max
Glyma.13G308500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 40419051-40429050 Glycine max
Glyma.13G308500 10.0kb downstream 10.0kb downstream 15760 true Chr13: 40403291-40419050 Glycine max
Glyma.13G308500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 40403291-40413290 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030346 5273 Angiosperm View MSA
122308677 5265 Fabidae View MSA
124066557 5270 Rosid View MSA
123741346 5271 Pentapetalae View MSA
122786927 5272 Eudicot View MSA
121351346 5274 Embryophyte View MSA
123428796 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.78288 0.0 33.7593    
cufflinks 4.37305 0.0 16.2921   Low
cufflinks 10.7005 0.0 40.6452   High
cufflinks 7.95602 0.0 30.733    
cufflinks 4.2992 0.0 18.1024   Low
cufflinks 11.0694 0.0 42.0667   High
cufflinks 6.94758 0.0 24.574    
cufflinks 8.22717 0.0 31.4245    
cufflinks 6.69817 0.0 26.0888    
cufflinks 0.917        
cufflinks 1.507        
cufflinks 1.92       High
cufflinks 0.96        
cufflinks 0.662       Low
cufflinks 0.925        
cufflinks 1.271        
cufflinks 0.456       Low
cufflinks 1.538        
cufflinks 1.391        
cufflinks 1.401        
cufflinks 1.29        
cufflinks 1.669        
cufflinks 1.488        
cufflinks 2.088       High
cufflinks 1.275        
cufflinks 0.742       Low

0 Strain