Gene : Glyma.13G308700 G. max Wm82.a2.v1
Defline:  (1 of 14) 4.2.1.3 - Aconitate hydratase / Citrate(isocitrate) hydro-lyase Genomic Order:  3087
Name:  ? Glyma.13G308700 Secondary Identifier:  ? PAC:30500823
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLYOXYLATE-BYPASS Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-5690 Glycine max pathologic  
Gmax PWY-6549 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G308700 0.5kb upstream 0.5kb upstream 8365 true Chr13: 40427362-40435726 Glycine max
Glyma.13G308700 0.5kb upstream 0.5kb upstream 500 false Chr13: 40435227-40435726 Glycine max
Glyma.13G308700 0.5kb downstream 0.5kb downstream 8365 true Chr13: 40426862-40435226 Glycine max
Glyma.13G308700 0.5kb downstream 0.5kb downstream 500 false Chr13: 40426862-40427361 Glycine max
Glyma.13G308700 1.0kb upstream 1.0kb upstream 8865 true Chr13: 40427362-40436226 Glycine max
Glyma.13G308700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 40435227-40436226 Glycine max
Glyma.13G308700 1.0kb downstream 1.0kb downstream 8865 true Chr13: 40426362-40435226 Glycine max
Glyma.13G308700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 40426362-40427361 Glycine max
Glyma.13G308700 2.0kb upstream 2.0kb upstream 9865 true Chr13: 40427362-40437226 Glycine max
Glyma.13G308700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 40435227-40437226 Glycine max
Glyma.13G308700 2.0kb downstream 2.0kb downstream 9865 true Chr13: 40425362-40435226 Glycine max
Glyma.13G308700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 40425362-40427361 Glycine max
Glyma.13G308700 5.0kb upstream 5.0kb upstream 12865 true Chr13: 40427362-40440226 Glycine max
Glyma.13G308700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 40435227-40440226 Glycine max
Glyma.13G308700 5.0kb downstream 5.0kb downstream 12865 true Chr13: 40422362-40435226 Glycine max
Glyma.13G308700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 40422362-40427361 Glycine max
Glyma.13G308700 10.0kb upstream 10.0kb upstream 17865 true Chr13: 40427362-40445226 Glycine max
Glyma.13G308700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 40435227-40445226 Glycine max
Glyma.13G308700 10.0kb downstream 10.0kb downstream 17865 true Chr13: 40417362-40435226 Glycine max
Glyma.13G308700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 40417362-40427361 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303297 5265 Fabidae View MSA
124069488 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.9597 0.0 161.504 High  
cufflinks 16.4359 0.0 51.8258    
cufflinks 15.7047 0.0 49.4736    
cufflinks 42.6345 0.0 136.247 High High
cufflinks 43.5071 0.0 140.658 High High
cufflinks 43.1166 0.0 138.999 High High
cufflinks 11.2917 0.0 34.0941   Low
cufflinks 27.6495 0.0 98.2855 High  
cufflinks 22.164 0.0 93.2812 High  
cufflinks 10.673     High High
cufflinks 3.851        
cufflinks 5.743        
cufflinks 15.986     High High
cufflinks 14.312     High High
cufflinks 2.171       Low
cufflinks 4.591        
cufflinks 9.324     High  
cufflinks 11.228     High High
cufflinks 6.88        
cufflinks 4.001        
cufflinks 5.134        
cufflinks 5.065        
cufflinks 4.982        
cufflinks 6.633     High  
cufflinks 4.198        
cufflinks 6.997     High  

0 Strain