Gene : Glyma.13G311700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32295:SF12 - PROTEIN IQ-DOMAIN 15-RELATED Genomic Order:  3117
Name:  ? Glyma.13G311700 Secondary Identifier:  ? PAC:30502129
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G311700 0.5kb upstream 0.5kb upstream 6996 true Chr13: 40700438-40707433 Glycine max
Glyma.13G311700 0.5kb upstream 0.5kb upstream 500 false Chr13: 40700438-40700937 Glycine max
Glyma.13G311700 0.5kb downstream 0.5kb downstream 6996 true Chr13: 40700938-40707933 Glycine max
Glyma.13G311700 0.5kb downstream 0.5kb downstream 500 false Chr13: 40707434-40707933 Glycine max
Glyma.13G311700 1.0kb upstream 1.0kb upstream 7496 true Chr13: 40699938-40707433 Glycine max
Glyma.13G311700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 40699938-40700937 Glycine max
Glyma.13G311700 1.0kb downstream 1.0kb downstream 7496 true Chr13: 40700938-40708433 Glycine max
Glyma.13G311700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 40707434-40708433 Glycine max
Glyma.13G311700 2.0kb upstream 2.0kb upstream 8496 true Chr13: 40698938-40707433 Glycine max
Glyma.13G311700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 40698938-40700937 Glycine max
Glyma.13G311700 2.0kb downstream 2.0kb downstream 8496 true Chr13: 40700938-40709433 Glycine max
Glyma.13G311700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 40707434-40709433 Glycine max
Glyma.13G311700 5.0kb upstream 5.0kb upstream 11496 true Chr13: 40695938-40707433 Glycine max
Glyma.13G311700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 40695938-40700937 Glycine max
Glyma.13G311700 5.0kb downstream 5.0kb downstream 11496 true Chr13: 40700938-40712433 Glycine max
Glyma.13G311700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 40707434-40712433 Glycine max
Glyma.13G311700 10.0kb upstream 10.0kb upstream 16496 true Chr13: 40690938-40707433 Glycine max
Glyma.13G311700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 40690938-40700937 Glycine max
Glyma.13G311700 10.0kb downstream 10.0kb downstream 16496 true Chr13: 40700938-40717433 Glycine max
Glyma.13G311700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 40707434-40717433 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306492 5265 Fabidae View MSA
124066612 5270 Rosid View MSA
123736615 5271 Pentapetalae View MSA
122788189 5272 Eudicot View MSA
122046736 5273 Angiosperm View MSA
121351537 5274 Embryophyte View MSA
123382213 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.87353 0.0 34.286    
cufflinks 8.60461 0.0 35.8285    
cufflinks 2.89029 0.0 13.7801   Low
cufflinks 15.0842 0.0 53.1795   High
cufflinks 6.41379 0.0 33.7414    
cufflinks 11.0172 0.0 43.7721    
cufflinks 12.2541 0.0 47.9896    
cufflinks 9.48126 0.0 34.1548    
cufflinks 7.44571 0.0 31.4852    
cufflinks 1.376        
cufflinks 0.421       Low
cufflinks 0.496        
cufflinks 0.786        
cufflinks 0.684        
cufflinks 0.291       Low
cufflinks 1.481       High
cufflinks 1.067        
cufflinks 0.987        
cufflinks 0.786        
cufflinks 1.358        
cufflinks 0.58        
cufflinks 1.385        
cufflinks 1.55       High
cufflinks 0.42       Low
cufflinks 1.377        
cufflinks 0.781        

0 Strain