Gene : Glyma.13G298200 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG4031 - Vesicle coat protein clathrin, light chain Genomic Order:  2982
Name:  ? Glyma.13G298200 Secondary Identifier:  ? PAC:30506079
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G298200 0.5kb upstream 0.5kb upstream 2851 true Chr13: 39676082-39678932 Glycine max
Glyma.13G298200 0.5kb upstream 0.5kb upstream 500 false Chr13: 39678433-39678932 Glycine max
Glyma.13G298200 0.5kb downstream 0.5kb downstream 2851 true Chr13: 39675582-39678432 Glycine max
Glyma.13G298200 0.5kb downstream 0.5kb downstream 500 false Chr13: 39675582-39676081 Glycine max
Glyma.13G298200 1.0kb upstream 1.0kb upstream 3351 true Chr13: 39676082-39679432 Glycine max
Glyma.13G298200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 39678433-39679432 Glycine max
Glyma.13G298200 1.0kb downstream 1.0kb downstream 3351 true Chr13: 39675082-39678432 Glycine max
Glyma.13G298200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 39675082-39676081 Glycine max
Glyma.13G298200 2.0kb upstream 2.0kb upstream 4351 true Chr13: 39676082-39680432 Glycine max
Glyma.13G298200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 39678433-39680432 Glycine max
Glyma.13G298200 2.0kb downstream 2.0kb downstream 4351 true Chr13: 39674082-39678432 Glycine max
Glyma.13G298200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 39674082-39676081 Glycine max
Glyma.13G298200 5.0kb upstream 5.0kb upstream 7351 true Chr13: 39676082-39683432 Glycine max
Glyma.13G298200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 39678433-39683432 Glycine max
Glyma.13G298200 5.0kb downstream 5.0kb downstream 7351 true Chr13: 39671082-39678432 Glycine max
Glyma.13G298200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 39671082-39676081 Glycine max
Glyma.13G298200 10.0kb upstream 10.0kb upstream 12351 true Chr13: 39676082-39688432 Glycine max
Glyma.13G298200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 39678433-39688432 Glycine max
Glyma.13G298200 10.0kb downstream 10.0kb downstream 12351 true Chr13: 39666082-39678432 Glycine max
Glyma.13G298200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 39666082-39676081 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310127 5265 Fabidae View MSA
124061601 5270 Rosid View MSA
123752626 5271 Pentapetalae View MSA
122796141 5272 Eudicot View MSA
122042029 5273 Angiosperm View MSA
121347289 5274 Embryophyte View MSA
123426291 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.313791 0.0 1.19395   High
cufflinks 0.0379496 0.0 0.158077 Low  
cufflinks 0.0120597 0.0 0.0554043 Low  
cufflinks 0.0271998 0.0 0.116565 Low  
cufflinks 0.01251 0.0 0.0572982 Low  
cufflinks 0.00207416 0.0 0.012498 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.069     Low  
cufflinks 0.008     Low  
cufflinks 0.248       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.042     Low  
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.113        
cufflinks 1.251       High
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.008     Low  
cufflinks 0.009     Low  
cufflinks 0.014     Low  
cufflinks 0.034     Low  

0 Strain