Gene : Glyma.13G299700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31901:SF10 - AUXIN-RESPONSIVE GH3 FAMILY PROTEIN Genomic Order:  2997
Name:  ? Glyma.13G299700 Secondary Identifier:  ? PAC:30503784
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G299700 0.5kb upstream 0.5kb upstream 5357 true Chr13: 39779876-39785232 Glycine max
Glyma.13G299700 0.5kb upstream 0.5kb upstream 500 false Chr13: 39784733-39785232 Glycine max
Glyma.13G299700 0.5kb downstream 0.5kb downstream 5357 true Chr13: 39779376-39784732 Glycine max
Glyma.13G299700 0.5kb downstream 0.5kb downstream 500 false Chr13: 39779376-39779875 Glycine max
Glyma.13G299700 1.0kb upstream 1.0kb upstream 5857 true Chr13: 39779876-39785732 Glycine max
Glyma.13G299700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 39784733-39785732 Glycine max
Glyma.13G299700 1.0kb downstream 1.0kb downstream 5857 true Chr13: 39778876-39784732 Glycine max
Glyma.13G299700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 39778876-39779875 Glycine max
Glyma.13G299700 2.0kb upstream 2.0kb upstream 6857 true Chr13: 39779876-39786732 Glycine max
Glyma.13G299700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 39784733-39786732 Glycine max
Glyma.13G299700 2.0kb downstream 2.0kb downstream 6857 true Chr13: 39777876-39784732 Glycine max
Glyma.13G299700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 39777876-39779875 Glycine max
Glyma.13G299700 5.0kb upstream 5.0kb upstream 9857 true Chr13: 39779876-39789732 Glycine max
Glyma.13G299700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 39784733-39789732 Glycine max
Glyma.13G299700 5.0kb downstream 5.0kb downstream 9857 true Chr13: 39774876-39784732 Glycine max
Glyma.13G299700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 39774876-39779875 Glycine max
Glyma.13G299700 10.0kb upstream 10.0kb upstream 14857 true Chr13: 39779876-39794732 Glycine max
Glyma.13G299700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 39784733-39794732 Glycine max
Glyma.13G299700 10.0kb downstream 10.0kb downstream 14857 true Chr13: 39769876-39784732 Glycine max
Glyma.13G299700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 39769876-39779875 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255078 5265 Fabidae View MSA
124061485 5270 Rosid View MSA
123750974 5271 Pentapetalae View MSA
122788178 5272 Eudicot View MSA
122044155 5273 Angiosperm View MSA
121349637 5274 Embryophyte View MSA
123381383 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0767642 0.0 0.302826 Low  
cufflinks 0.22397 0.0 0.845224 Low  
cufflinks 1.2187 0.0 4.06099   High
cufflinks 0.300738 0.0 1.11844    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.143516 0.0 0.55234 Low  
cufflinks 0.0223684 0.0 0.0934013 Low Low
cufflinks 0.0415564 0.0 0.167641 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.161        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.627       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.114        
cufflinks 0.006     Low Low
cufflinks 0.795       High
cufflinks 0.262        
cufflinks 0.137        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.066     Low  
cufflinks 0.092     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.098        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain