Gene : Glyma.13G300300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11205:SF24 - 40S RIBOSOMAL PROTEIN S5-1-RELATED Genomic Order:  3003
Name:  ? Glyma.13G300300 Secondary Identifier:  ? PAC:30504953
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G300300 0.5kb upstream 0.5kb upstream 2884 true Chr13: 39833806-39836689 Glycine max
Glyma.13G300300 0.5kb upstream 0.5kb upstream 500 false Chr13: 39833806-39834305 Glycine max
Glyma.13G300300 0.5kb downstream 0.5kb downstream 2884 true Chr13: 39834306-39837189 Glycine max
Glyma.13G300300 0.5kb downstream 0.5kb downstream 500 false Chr13: 39836690-39837189 Glycine max
Glyma.13G300300 1.0kb upstream 1.0kb upstream 3384 true Chr13: 39833306-39836689 Glycine max
Glyma.13G300300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 39833306-39834305 Glycine max
Glyma.13G300300 1.0kb downstream 1.0kb downstream 3384 true Chr13: 39834306-39837689 Glycine max
Glyma.13G300300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 39836690-39837689 Glycine max
Glyma.13G300300 2.0kb upstream 2.0kb upstream 4384 true Chr13: 39832306-39836689 Glycine max
Glyma.13G300300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 39832306-39834305 Glycine max
Glyma.13G300300 2.0kb downstream 2.0kb downstream 4384 true Chr13: 39834306-39838689 Glycine max
Glyma.13G300300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 39836690-39838689 Glycine max
Glyma.13G300300 5.0kb upstream 5.0kb upstream 7384 true Chr13: 39829306-39836689 Glycine max
Glyma.13G300300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 39829306-39834305 Glycine max
Glyma.13G300300 5.0kb downstream 5.0kb downstream 7384 true Chr13: 39834306-39841689 Glycine max
Glyma.13G300300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 39836690-39841689 Glycine max
Glyma.13G300300 10.0kb upstream 10.0kb upstream 12384 true Chr13: 39824306-39836689 Glycine max
Glyma.13G300300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 39824306-39834305 Glycine max
Glyma.13G300300 10.0kb downstream 10.0kb downstream 12384 true Chr13: 39834306-39846689 Glycine max
Glyma.13G300300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 39836690-39846689 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311840 5265 Fabidae View MSA
124064641 5270 Rosid View MSA
123749742 5271 Pentapetalae View MSA
122785829 5272 Eudicot View MSA
122048966 5273 Angiosperm View MSA
121345669 5274 Embryophyte View MSA
123423957 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.9061 0.0 159.882 High Low
cufflinks 106.915 0.0 307.373 High  
cufflinks 44.1601 0.0 118.338 High Low
cufflinks 76.8332 0.0 213.247 High  
cufflinks 160.295 0.0 491.437 High High
cufflinks 116.607 0.0 339.686 High  
cufflinks 162.64 0.0 498.092 High High
cufflinks 89.3512 0.0 251.924 High  
cufflinks 115.149 0.0 334.852 High  
cufflinks 32.197     High  
cufflinks 10.011     High Low
cufflinks 23.861     High  
cufflinks 70.678     High High
cufflinks 106.549     High High
cufflinks 9.86     High Low
cufflinks 21.936     High  
cufflinks 17.051     High  
cufflinks 26.112     High  
cufflinks 41.463     High  
cufflinks 16.066     High  
cufflinks 13.221     High  
cufflinks 16.7     High  
cufflinks 29.979     High  
cufflinks 11.464     High Low
cufflinks 18.397     High  
cufflinks 19.002     High  

0 Strain