Gene : Glyma.13G300500 G. max Wm82.a2.v1
Defline:  (1 of 4) 2.1.2.5 - Glutamate formimidoyltransferase / Glutamate formyltransferase Genomic Order:  3005
Name:  ? Glyma.13G300500 Secondary Identifier:  ? PAC:30505927
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3841 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G300500 0.5kb upstream 0.5kb upstream 3138 true Chr13: 39843948-39847085 Glycine max
Glyma.13G300500 0.5kb upstream 0.5kb upstream 500 false Chr13: 39846586-39847085 Glycine max
Glyma.13G300500 0.5kb downstream 0.5kb downstream 3138 true Chr13: 39843448-39846585 Glycine max
Glyma.13G300500 0.5kb downstream 0.5kb downstream 500 false Chr13: 39843448-39843947 Glycine max
Glyma.13G300500 1.0kb upstream 1.0kb upstream 3638 true Chr13: 39843948-39847585 Glycine max
Glyma.13G300500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 39846586-39847585 Glycine max
Glyma.13G300500 1.0kb downstream 1.0kb downstream 3638 true Chr13: 39842948-39846585 Glycine max
Glyma.13G300500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 39842948-39843947 Glycine max
Glyma.13G300500 2.0kb upstream 2.0kb upstream 4638 true Chr13: 39843948-39848585 Glycine max
Glyma.13G300500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 39846586-39848585 Glycine max
Glyma.13G300500 2.0kb downstream 2.0kb downstream 4638 true Chr13: 39841948-39846585 Glycine max
Glyma.13G300500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 39841948-39843947 Glycine max
Glyma.13G300500 5.0kb upstream 5.0kb upstream 7638 true Chr13: 39843948-39851585 Glycine max
Glyma.13G300500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 39846586-39851585 Glycine max
Glyma.13G300500 5.0kb downstream 5.0kb downstream 7638 true Chr13: 39838948-39846585 Glycine max
Glyma.13G300500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 39838948-39843947 Glycine max
Glyma.13G300500 10.0kb upstream 10.0kb upstream 12638 true Chr13: 39843948-39856585 Glycine max
Glyma.13G300500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 39846586-39856585 Glycine max
Glyma.13G300500 10.0kb downstream 10.0kb downstream 12638 true Chr13: 39833948-39846585 Glycine max
Glyma.13G300500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 39833948-39843947 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310861 5265 Fabidae View MSA
124070892 5270 Rosid View MSA
123745948 5271 Pentapetalae View MSA
122795317 5272 Eudicot View MSA
122048049 5273 Angiosperm View MSA
121344000 5274 Embryophyte View MSA
123424939 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.63486 0.0 24.4119   High
cufflinks 1.89916 0.0 7.30219    
cufflinks 2.49762 0.0 9.05668    
cufflinks 2.27826 0.0 11.0636    
cufflinks 1.27054 0.0 5.54778   Low
cufflinks 1.08055 0.0 6.19699   Low
cufflinks 3.06151 0.0 13.7825    
cufflinks 2.48077 0.0 11.7428    
cufflinks 1.93032 0.0 9.84141    
cufflinks 0.194       Low
cufflinks 0.384        
cufflinks 0.712        
cufflinks 0.193       Low
cufflinks 0.113       Low
cufflinks 0.593        
cufflinks 0.907       High
cufflinks 0.26        
cufflinks 0.627        
cufflinks 0.331        
cufflinks 0.828        
cufflinks 0.208       Low
cufflinks 0.997       High
cufflinks 0.715        
cufflinks 0.526        
cufflinks 0.94       High
cufflinks 0.293        

0 Strain