Gene : Glyma.13G304300 G. max Wm82.a2.v1

Defline:  (1 of 8) PTHR31241:SF2 - DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2A-RELATED Genomic Order:  3043
Name:  ? Glyma.13G304300 Secondary Identifier:  ? PAC:30504035

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G304300 0.5kb upstream 0.5kb upstream 2500 true Chr13: 40128391-40130890 Glycine max
Glyma.13G304300 0.5kb upstream 0.5kb upstream 500 false Chr13: 40130391-40130890 Glycine max
Glyma.13G304300 0.5kb downstream 0.5kb downstream 2500 true Chr13: 40127891-40130390 Glycine max
Glyma.13G304300 0.5kb downstream 0.5kb downstream 500 false Chr13: 40127891-40128390 Glycine max
Glyma.13G304300 1.0kb upstream 1.0kb upstream 3000 true Chr13: 40128391-40131390 Glycine max
Glyma.13G304300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 40130391-40131390 Glycine max
Glyma.13G304300 1.0kb downstream 1.0kb downstream 3000 true Chr13: 40127391-40130390 Glycine max
Glyma.13G304300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 40127391-40128390 Glycine max
Glyma.13G304300 2.0kb upstream 2.0kb upstream 4000 true Chr13: 40128391-40132390 Glycine max
Glyma.13G304300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 40130391-40132390 Glycine max
Glyma.13G304300 2.0kb downstream 2.0kb downstream 4000 true Chr13: 40126391-40130390 Glycine max
Glyma.13G304300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 40126391-40128390 Glycine max
Glyma.13G304300 5.0kb upstream 5.0kb upstream 7000 true Chr13: 40128391-40135390 Glycine max
Glyma.13G304300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 40130391-40135390 Glycine max
Glyma.13G304300 5.0kb downstream 5.0kb downstream 7000 true Chr13: 40123391-40130390 Glycine max
Glyma.13G304300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 40123391-40128390 Glycine max
Glyma.13G304300 10.0kb upstream 10.0kb upstream 12000 true Chr13: 40128391-40140390 Glycine max
Glyma.13G304300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 40130391-40140390 Glycine max
Glyma.13G304300 10.0kb downstream 10.0kb downstream 12000 true Chr13: 40118391-40130390 Glycine max
Glyma.13G304300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 40118391-40128390 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310464 5265 Fabidae View MSA
124068554 5270 Rosid View MSA
123752289 5271 Pentapetalae View MSA
122797550 5272 Eudicot View MSA
122049756 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349420 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.03864 0.0 20.7051   Low
cufflinks 25.4398 0.0 67.9231 High High
cufflinks 11.7239 0.0 32.4695    
cufflinks 14.1378 0.0 38.6657    
cufflinks 15.8555 0.0 43.05    
cufflinks 24.1826 0.0 64.6033 High  
cufflinks 25.2628 0.0 67.4582 High High
cufflinks 11.816 0.0 32.7635    
cufflinks 18.944 0.0 50.9564    
cufflinks 8.317     High  
cufflinks 2.869       Low
cufflinks 8.314     High  
cufflinks 5.821        
cufflinks 6.582        
cufflinks 11.329     High  
cufflinks 15.895     High High
cufflinks 4.612        
cufflinks 9.761     High  
cufflinks 13.051     High  
cufflinks 13.04     High  
cufflinks 2.854       Low
cufflinks 14.397     High  
cufflinks 17.868     High High
cufflinks 2.388       Low
cufflinks 14.982     High High
cufflinks 5.298        

0 Strain