Gene : Glyma.13G291300 G. max Wm82.a2.v1
Defline:  (1 of 5) 1.1.1.86 - Ketol-acid reductoisomerase (NADP(+)) / Dihydroxyisovalerate dehydrogenase (isomerizing) Genomic Order:  2913
Name:  ? Glyma.13G291300 Secondary Identifier:  ? PAC:30501018
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax BRANCHED-CHAIN-AA-SYN-PWY Glycine max pathologic  
Gmax ILEUSYN-PWY Glycine max pathologic  
Gmax PWY-3001 Glycine max pathologic  
Gmax VALSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G291300 0.5kb upstream 0.5kb upstream 4323 true Chr13: 39150251-39154573 Glycine max
Glyma.13G291300 0.5kb upstream 0.5kb upstream 500 false Chr13: 39154074-39154573 Glycine max
Glyma.13G291300 0.5kb downstream 0.5kb downstream 4323 true Chr13: 39149751-39154073 Glycine max
Glyma.13G291300 0.5kb downstream 0.5kb downstream 500 false Chr13: 39149751-39150250 Glycine max
Glyma.13G291300 1.0kb upstream 1.0kb upstream 4823 true Chr13: 39150251-39155073 Glycine max
Glyma.13G291300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 39154074-39155073 Glycine max
Glyma.13G291300 1.0kb downstream 1.0kb downstream 4823 true Chr13: 39149251-39154073 Glycine max
Glyma.13G291300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 39149251-39150250 Glycine max
Glyma.13G291300 2.0kb upstream 2.0kb upstream 5823 true Chr13: 39150251-39156073 Glycine max
Glyma.13G291300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 39154074-39156073 Glycine max
Glyma.13G291300 2.0kb downstream 2.0kb downstream 5823 true Chr13: 39148251-39154073 Glycine max
Glyma.13G291300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 39148251-39150250 Glycine max
Glyma.13G291300 5.0kb upstream 5.0kb upstream 8823 true Chr13: 39150251-39159073 Glycine max
Glyma.13G291300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 39154074-39159073 Glycine max
Glyma.13G291300 5.0kb downstream 5.0kb downstream 8823 true Chr13: 39145251-39154073 Glycine max
Glyma.13G291300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 39145251-39150250 Glycine max
Glyma.13G291300 10.0kb upstream 10.0kb upstream 13823 true Chr13: 39150251-39164073 Glycine max
Glyma.13G291300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 39154074-39164073 Glycine max
Glyma.13G291300 10.0kb downstream 10.0kb downstream 13823 true Chr13: 39140251-39154073 Glycine max
Glyma.13G291300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 39140251-39150250 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299493 5265 Fabidae View MSA
124060504 5270 Rosid View MSA
123749649 5271 Pentapetalae View MSA
122794973 5272 Eudicot View MSA
122043531 5273 Angiosperm View MSA
121344443 5274 Embryophyte View MSA
123428276 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 60.4072 0.0 180.297 High  
cufflinks 62.2724 0.0 186.471 High  
cufflinks 25.9322 0.0 70.4783 High Low
cufflinks 62.4582 0.0 187.37 High  
cufflinks 98.0416 0.0 319.475 High  
cufflinks 36.7382 0.0 102.968 High  
cufflinks 190.417 0.0 729.726 High High
cufflinks 54.5774 0.0 160.461 High  
cufflinks 78.0694 0.0 243.326 High  
cufflinks 27.405     High  
cufflinks 5.747     High Low
cufflinks 25.81     High  
cufflinks 58.099     High High
cufflinks 78.946     High High
cufflinks 17.241     High  
cufflinks 26.982     High  
cufflinks 20.317     High  
cufflinks 26.531     High  
cufflinks 40.861     High  
cufflinks 24.713     High  
cufflinks 10.123     High Low
cufflinks 24.368     High  
cufflinks 30.208     High  
cufflinks 8.171     High Low
cufflinks 25.892     High  
cufflinks 16.993     High  

0 Strain