Gene : Glyma.13G292500 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED Genomic Order:  2925
Name:  ? Glyma.13G292500 Secondary Identifier:  ? PAC:30502724
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G292500 0.5kb upstream 0.5kb upstream 3853 true Chr13: 39245973-39249825 Glycine max
Glyma.13G292500 0.5kb upstream 0.5kb upstream 500 false Chr13: 39245973-39246472 Glycine max
Glyma.13G292500 0.5kb downstream 0.5kb downstream 3853 true Chr13: 39246473-39250325 Glycine max
Glyma.13G292500 0.5kb downstream 0.5kb downstream 500 false Chr13: 39249826-39250325 Glycine max
Glyma.13G292500 1.0kb upstream 1.0kb upstream 4353 true Chr13: 39245473-39249825 Glycine max
Glyma.13G292500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 39245473-39246472 Glycine max
Glyma.13G292500 1.0kb downstream 1.0kb downstream 4353 true Chr13: 39246473-39250825 Glycine max
Glyma.13G292500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 39249826-39250825 Glycine max
Glyma.13G292500 2.0kb upstream 2.0kb upstream 5353 true Chr13: 39244473-39249825 Glycine max
Glyma.13G292500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 39244473-39246472 Glycine max
Glyma.13G292500 2.0kb downstream 2.0kb downstream 5353 true Chr13: 39246473-39251825 Glycine max
Glyma.13G292500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 39249826-39251825 Glycine max
Glyma.13G292500 5.0kb upstream 5.0kb upstream 8353 true Chr13: 39241473-39249825 Glycine max
Glyma.13G292500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 39241473-39246472 Glycine max
Glyma.13G292500 5.0kb downstream 5.0kb downstream 8353 true Chr13: 39246473-39254825 Glycine max
Glyma.13G292500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 39249826-39254825 Glycine max
Glyma.13G292500 10.0kb upstream 10.0kb upstream 13353 true Chr13: 39236473-39249825 Glycine max
Glyma.13G292500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 39236473-39246472 Glycine max
Glyma.13G292500 10.0kb downstream 10.0kb downstream 13353 true Chr13: 39246473-39259825 Glycine max
Glyma.13G292500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 39249826-39259825 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304402 5265 Fabidae View MSA
124070231 5270 Rosid View MSA
123742325 5271 Pentapetalae View MSA
122789743 5272 Eudicot View MSA
122046366 5273 Angiosperm View MSA
121350950 5274 Embryophyte View MSA
123381946 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.9682 0.0 49.3772   High
cufflinks 5.83976 0.0 21.579    
cufflinks 4.44472 0.0 17.7752    
cufflinks 17.9972 0.0 69.2901   High
cufflinks 1.29771 0.0 6.45861   Low
cufflinks 5.61505 0.0 18.1526    
cufflinks 6.0616 0.0 22.1531    
cufflinks 1.67092 0.0 5.79779   Low
cufflinks 1.38725 0.0 6.69699   Low
cufflinks 0.089     Low  
cufflinks 0.021     Low Low
cufflinks 1.784        
cufflinks 0.256        
cufflinks 0.223        
cufflinks 0.097        
cufflinks 3.686       High
cufflinks 0.101        
cufflinks 2.638        
cufflinks 1.926        
cufflinks 4.093       High
cufflinks 0.037     Low Low
cufflinks 4.183       High
cufflinks 2.36        
cufflinks 0.06        
cufflinks 2.821        
cufflinks 0.022     Low Low

0 Strain