Gene : Glyma.13G292800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR13301:SF69 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  2928
Name:  ? Glyma.13G292800 Secondary Identifier:  ? PAC:30501363
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G292800 0.5kb upstream 0.5kb upstream 4595 true Chr13: 39277130-39281724 Glycine max
Glyma.13G292800 0.5kb upstream 0.5kb upstream 500 false Chr13: 39281225-39281724 Glycine max
Glyma.13G292800 0.5kb downstream 0.5kb downstream 4595 true Chr13: 39276630-39281224 Glycine max
Glyma.13G292800 0.5kb downstream 0.5kb downstream 500 false Chr13: 39276630-39277129 Glycine max
Glyma.13G292800 1.0kb upstream 1.0kb upstream 5095 true Chr13: 39277130-39282224 Glycine max
Glyma.13G292800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 39281225-39282224 Glycine max
Glyma.13G292800 1.0kb downstream 1.0kb downstream 5095 true Chr13: 39276130-39281224 Glycine max
Glyma.13G292800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 39276130-39277129 Glycine max
Glyma.13G292800 2.0kb upstream 2.0kb upstream 6095 true Chr13: 39277130-39283224 Glycine max
Glyma.13G292800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 39281225-39283224 Glycine max
Glyma.13G292800 2.0kb downstream 2.0kb downstream 6095 true Chr13: 39275130-39281224 Glycine max
Glyma.13G292800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 39275130-39277129 Glycine max
Glyma.13G292800 5.0kb upstream 5.0kb upstream 9095 true Chr13: 39277130-39286224 Glycine max
Glyma.13G292800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 39281225-39286224 Glycine max
Glyma.13G292800 5.0kb downstream 5.0kb downstream 9095 true Chr13: 39272130-39281224 Glycine max
Glyma.13G292800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 39272130-39277129 Glycine max
Glyma.13G292800 10.0kb upstream 10.0kb upstream 14095 true Chr13: 39277130-39291224 Glycine max
Glyma.13G292800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 39281225-39291224 Glycine max
Glyma.13G292800 10.0kb downstream 10.0kb downstream 14095 true Chr13: 39267130-39281224 Glycine max
Glyma.13G292800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 39267130-39277129 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312955 5265 Fabidae View MSA
124069562 5270 Rosid View MSA
123743912 5271 Pentapetalae View MSA
122795222 5272 Eudicot View MSA
122050471 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350837 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.628241 0.0 3.71613    
cufflinks 4.64304 0.0 18.9643    
cufflinks 8.47152 0.0 30.2471    
cufflinks 0.184508 0.0 0.890528   Low
cufflinks 12.0659 0.0 41.3914    
cufflinks 15.29 0.0 51.6728   High
cufflinks 0.0809736 0.0 0.322523 Low Low
cufflinks 0.449304 0.0 2.83409    
cufflinks 5.43618 0.0 21.2584    
cufflinks 2.276        
cufflinks 0.434        
cufflinks 0.943        
cufflinks 4.499        
cufflinks 5.329       High
cufflinks 0.027     Low Low
cufflinks 2.25        
cufflinks 0.277        
cufflinks 3.004        
cufflinks 1.695        
cufflinks 3.25        
cufflinks 0.318        
cufflinks 2.972        
cufflinks 4.057        
cufflinks 0.091       Low
cufflinks 2.627        
cufflinks 0.952        

0 Strain