Gene : Glyma.13G335900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21726//PTHR21726:SF39 - PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED Genomic Order:  3359
Name:  ? Glyma.13G335900 Secondary Identifier:  ? PAC:30502379
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G335900 0.5kb upstream 0.5kb upstream 5642 true Chr13: 42930978-42936619 Glycine max
Glyma.13G335900 0.5kb upstream 0.5kb upstream 500 false Chr13: 42930978-42931477 Glycine max
Glyma.13G335900 0.5kb downstream 0.5kb downstream 5642 true Chr13: 42931478-42937119 Glycine max
Glyma.13G335900 0.5kb downstream 0.5kb downstream 500 false Chr13: 42936620-42937119 Glycine max
Glyma.13G335900 1.0kb upstream 1.0kb upstream 6142 true Chr13: 42930478-42936619 Glycine max
Glyma.13G335900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 42930478-42931477 Glycine max
Glyma.13G335900 1.0kb downstream 1.0kb downstream 6142 true Chr13: 42931478-42937619 Glycine max
Glyma.13G335900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 42936620-42937619 Glycine max
Glyma.13G335900 2.0kb upstream 2.0kb upstream 7142 true Chr13: 42929478-42936619 Glycine max
Glyma.13G335900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 42929478-42931477 Glycine max
Glyma.13G335900 2.0kb downstream 2.0kb downstream 7142 true Chr13: 42931478-42938619 Glycine max
Glyma.13G335900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 42936620-42938619 Glycine max
Glyma.13G335900 5.0kb upstream 5.0kb upstream 10142 true Chr13: 42926478-42936619 Glycine max
Glyma.13G335900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 42926478-42931477 Glycine max
Glyma.13G335900 5.0kb downstream 5.0kb downstream 10142 true Chr13: 42931478-42941619 Glycine max
Glyma.13G335900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 42936620-42941619 Glycine max
Glyma.13G335900 10.0kb upstream 10.0kb upstream 15142 true Chr13: 42921478-42936619 Glycine max
Glyma.13G335900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 42921478-42931477 Glycine max
Glyma.13G335900 10.0kb downstream 10.0kb downstream 15142 true Chr13: 42931478-42946619 Glycine max
Glyma.13G335900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 42936620-42946619 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313122 5265 Fabidae View MSA
124071026 5270 Rosid View MSA
123753280 5271 Pentapetalae View MSA
122795143 5272 Eudicot View MSA
122044494 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.46788 0.0 9.08844   High
cufflinks 0.0645815 0.0 0.254183 Low Low
cufflinks 0.928564 0.0 4.66479    
cufflinks 0.340538 0.0 2.02839    
cufflinks 0.683295 0.0 3.63504    
cufflinks 0.842447 0.0 4.221    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.241823 0.0 1.51018    
cufflinks 0.830578 0.0 4.24757    
cufflinks 0.823        
cufflinks 1.775       High
cufflinks 0.154        
cufflinks 0.103        
cufflinks 0.014     Low Low
cufflinks 0.742        
cufflinks 0.033     Low  
cufflinks 2.288       High
cufflinks 0.059     Low  
cufflinks 0.008     Low Low
cufflinks 0.005     Low Low
cufflinks 0.83        
cufflinks 0.086     Low  
cufflinks 0.017     Low Low
cufflinks 1.762       High
cufflinks 0.026     Low  
cufflinks 1.121       High

0 Strain