Gene : Glyma.13G336100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR15371:SF2 - OUTER ENVELOPE PORE PROTEIN 16-1, CHLOROPLASTIC Genomic Order:  3361
Name:  ? Glyma.13G336100 Secondary Identifier:  ? PAC:30503079
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G336100 0.5kb upstream 0.5kb upstream 3013 true Chr13: 42945724-42948736 Glycine max
Glyma.13G336100 0.5kb upstream 0.5kb upstream 500 false Chr13: 42948237-42948736 Glycine max
Glyma.13G336100 0.5kb downstream 0.5kb downstream 3013 true Chr13: 42945224-42948236 Glycine max
Glyma.13G336100 0.5kb downstream 0.5kb downstream 500 false Chr13: 42945224-42945723 Glycine max
Glyma.13G336100 1.0kb upstream 1.0kb upstream 3513 true Chr13: 42945724-42949236 Glycine max
Glyma.13G336100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 42948237-42949236 Glycine max
Glyma.13G336100 1.0kb downstream 1.0kb downstream 3513 true Chr13: 42944724-42948236 Glycine max
Glyma.13G336100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 42944724-42945723 Glycine max
Glyma.13G336100 2.0kb upstream 2.0kb upstream 4513 true Chr13: 42945724-42950236 Glycine max
Glyma.13G336100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 42948237-42950236 Glycine max
Glyma.13G336100 2.0kb downstream 2.0kb downstream 4513 true Chr13: 42943724-42948236 Glycine max
Glyma.13G336100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 42943724-42945723 Glycine max
Glyma.13G336100 5.0kb upstream 5.0kb upstream 7513 true Chr13: 42945724-42953236 Glycine max
Glyma.13G336100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 42948237-42953236 Glycine max
Glyma.13G336100 5.0kb downstream 5.0kb downstream 7513 true Chr13: 42940724-42948236 Glycine max
Glyma.13G336100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 42940724-42945723 Glycine max
Glyma.13G336100 10.0kb upstream 10.0kb upstream 12513 true Chr13: 42945724-42958236 Glycine max
Glyma.13G336100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 42948237-42958236 Glycine max
Glyma.13G336100 10.0kb downstream 10.0kb downstream 12513 true Chr13: 42935724-42948236 Glycine max
Glyma.13G336100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 42935724-42945723 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304179 5265 Fabidae View MSA
124068444 5270 Rosid View MSA
123739321 5271 Pentapetalae View MSA
122787422 5272 Eudicot View MSA
122042494 5273 Angiosperm View MSA
121351081 5274 Embryophyte View MSA
123382000 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.2307 0.0 182.906 High  
cufflinks 42.7786 0.0 151.208 High  
cufflinks 50.065 0.0 178.307 High  
cufflinks 60.2631 0.0 213.798 High High
cufflinks 38.5131 0.0 139.74 High Low
cufflinks 45.8106 0.0 137.088 High  
cufflinks 53.0058 0.0 192.777 High  
cufflinks 66.4604 0.0 238.745 High High
cufflinks 37.3406 0.0 130.863 High Low
cufflinks 6.834        
cufflinks 2.766       Low
cufflinks 5.946        
cufflinks 3.875        
cufflinks 3.647        
cufflinks 1.495       Low
cufflinks 6.287        
cufflinks 4.549        
cufflinks 8.73     High High
cufflinks 5.191        
cufflinks 5.777        
cufflinks 3.174        
cufflinks 6.228        
cufflinks 5.264        
cufflinks 3.711        
cufflinks 7.021     High  
cufflinks 3.771        

0 Strain