Gene : Glyma.13G336800 G. max Wm82.a2.v1
Genomic Order:  3368 Name:  ? Glyma.13G336800
Secondary Identifier:  ? PAC:30505412
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G336800 0.5kb upstream 0.5kb upstream 3754 true Chr13: 43007969-43011722 Glycine max
Glyma.13G336800 0.5kb upstream 0.5kb upstream 500 false Chr13: 43007969-43008468 Glycine max
Glyma.13G336800 0.5kb downstream 0.5kb downstream 3754 true Chr13: 43008469-43012222 Glycine max
Glyma.13G336800 0.5kb downstream 0.5kb downstream 500 false Chr13: 43011723-43012222 Glycine max
Glyma.13G336800 1.0kb upstream 1.0kb upstream 4254 true Chr13: 43007469-43011722 Glycine max
Glyma.13G336800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 43007469-43008468 Glycine max
Glyma.13G336800 1.0kb downstream 1.0kb downstream 4254 true Chr13: 43008469-43012722 Glycine max
Glyma.13G336800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 43011723-43012722 Glycine max
Glyma.13G336800 2.0kb upstream 2.0kb upstream 5254 true Chr13: 43006469-43011722 Glycine max
Glyma.13G336800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 43006469-43008468 Glycine max
Glyma.13G336800 2.0kb downstream 2.0kb downstream 5254 true Chr13: 43008469-43013722 Glycine max
Glyma.13G336800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 43011723-43013722 Glycine max
Glyma.13G336800 5.0kb upstream 5.0kb upstream 8254 true Chr13: 43003469-43011722 Glycine max
Glyma.13G336800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 43003469-43008468 Glycine max
Glyma.13G336800 5.0kb downstream 5.0kb downstream 8254 true Chr13: 43008469-43016722 Glycine max
Glyma.13G336800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 43011723-43016722 Glycine max
Glyma.13G336800 10.0kb upstream 10.0kb upstream 13254 true Chr13: 42998469-43011722 Glycine max
Glyma.13G336800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 42998469-43008468 Glycine max
Glyma.13G336800 10.0kb downstream 10.0kb downstream 13254 true Chr13: 43008469-43021722 Glycine max
Glyma.13G336800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 43011723-43021722 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311111 5265 Fabidae View MSA
124067708 5270 Rosid View MSA
123746485 5271 Pentapetalae View MSA
122792199 5272 Eudicot View MSA
122045973 5273 Angiosperm View MSA
121346062 5274 Embryophyte View MSA
123425424 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.0795 0.0 79.4808   High
cufflinks 4.78999 0.0 33.9175    
cufflinks 19.2195 0.0 93.3145   High
cufflinks 3.53095 0.0 26.6525    
cufflinks 0.374315 0.0 3.97703   Low
cufflinks 0.57762 0.0 4.72699    
cufflinks 2.50133 0.0 14.2841    
cufflinks 1.87152 0.0 13.8411    
cufflinks 0.412674 0.0 3.09384   Low
cufflinks 0.103        
cufflinks 0.021     Low  
cufflinks 2.623       High
cufflinks 0.049     Low  
cufflinks 0.022     Low  
cufflinks 0.017     Low  
cufflinks 2.242       High
cufflinks 0.006     Low Low
cufflinks 1.432        
cufflinks 0.805        
cufflinks 3.369       High
cufflinks 0.009     Low Low
cufflinks 2.971       High
cufflinks 2.305       High
cufflinks 0.01     Low Low
cufflinks 3.187       High
cufflinks 0.02     Low  

0 Strain