Gene : Glyma.13G337100 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR21717:SF9 - PROTEIN TBF1 Genomic Order:  3371
Name:  ? Glyma.13G337100 Secondary Identifier:  ? PAC:30500296
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G337100 0.5kb upstream 0.5kb upstream 10064 true Chr13: 43014650-43024713 Glycine max
Glyma.13G337100 0.5kb upstream 0.5kb upstream 500 false Chr13: 43014650-43015149 Glycine max
Glyma.13G337100 0.5kb downstream 0.5kb downstream 10064 true Chr13: 43015150-43025213 Glycine max
Glyma.13G337100 0.5kb downstream 0.5kb downstream 500 false Chr13: 43024714-43025213 Glycine max
Glyma.13G337100 1.0kb upstream 1.0kb upstream 10564 true Chr13: 43014150-43024713 Glycine max
Glyma.13G337100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 43014150-43015149 Glycine max
Glyma.13G337100 1.0kb downstream 1.0kb downstream 10564 true Chr13: 43015150-43025713 Glycine max
Glyma.13G337100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 43024714-43025713 Glycine max
Glyma.13G337100 2.0kb upstream 2.0kb upstream 11564 true Chr13: 43013150-43024713 Glycine max
Glyma.13G337100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 43013150-43015149 Glycine max
Glyma.13G337100 2.0kb downstream 2.0kb downstream 11564 true Chr13: 43015150-43026713 Glycine max
Glyma.13G337100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 43024714-43026713 Glycine max
Glyma.13G337100 5.0kb upstream 5.0kb upstream 14564 true Chr13: 43010150-43024713 Glycine max
Glyma.13G337100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 43010150-43015149 Glycine max
Glyma.13G337100 5.0kb downstream 5.0kb downstream 14564 true Chr13: 43015150-43029713 Glycine max
Glyma.13G337100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 43024714-43029713 Glycine max
Glyma.13G337100 10.0kb upstream 10.0kb upstream 19564 true Chr13: 43005150-43024713 Glycine max
Glyma.13G337100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 43005150-43015149 Glycine max
Glyma.13G337100 10.0kb downstream 10.0kb downstream 19564 true Chr13: 43015150-43034713 Glycine max
Glyma.13G337100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 43024714-43034713 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308897 5265 Fabidae View MSA
124063345 5270 Rosid View MSA
123753061 5271 Pentapetalae View MSA
122788041 5272 Eudicot View MSA
122049318 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121348439 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.11526 0.0 6.3779   High
cufflinks 0.853421 0.0 3.31499    
cufflinks 1.09944 0.0 4.04911    
cufflinks 1.0685 0.0 5.57287    
cufflinks 0.57436 0.0 2.50267    
cufflinks 0.235695 0.0 1.15518 Low Low
cufflinks 0.796919 0.0 3.15544    
cufflinks 0.959742 0.0 3.59128    
cufflinks 0.510776 0.0 2.22716    
cufflinks 0.086     Low  
cufflinks 0.165        
cufflinks 0.374       High
cufflinks 0.138        
cufflinks 0.143        
cufflinks 0.043     Low Low
cufflinks 0.15        
cufflinks 0.083        
cufflinks 0.542       High
cufflinks 0.232        
cufflinks 0.056     Low Low
cufflinks 0.107        
cufflinks 0.089     Low  
cufflinks 0.09     Low  
cufflinks 0.158        
cufflinks 0.093     Low  
cufflinks 0.175        

0 Strain