Gene : Glyma.13G337200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31636:SF54 - SCARECROW-LIKE PROTEIN 14-RELATED Genomic Order:  3372
Name:  ? Glyma.13G337200 Secondary Identifier:  ? PAC:30503299
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G337200 0.5kb upstream 0.5kb upstream 2775 true Chr13: 43025025-43027799 Glycine max
Glyma.13G337200 0.5kb upstream 0.5kb upstream 500 false Chr13: 43025025-43025524 Glycine max
Glyma.13G337200 0.5kb downstream 0.5kb downstream 2775 true Chr13: 43025525-43028299 Glycine max
Glyma.13G337200 0.5kb downstream 0.5kb downstream 500 false Chr13: 43027800-43028299 Glycine max
Glyma.13G337200 1.0kb upstream 1.0kb upstream 3275 true Chr13: 43024525-43027799 Glycine max
Glyma.13G337200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 43024525-43025524 Glycine max
Glyma.13G337200 1.0kb downstream 1.0kb downstream 3275 true Chr13: 43025525-43028799 Glycine max
Glyma.13G337200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 43027800-43028799 Glycine max
Glyma.13G337200 2.0kb upstream 2.0kb upstream 4275 true Chr13: 43023525-43027799 Glycine max
Glyma.13G337200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 43023525-43025524 Glycine max
Glyma.13G337200 2.0kb downstream 2.0kb downstream 4275 true Chr13: 43025525-43029799 Glycine max
Glyma.13G337200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 43027800-43029799 Glycine max
Glyma.13G337200 5.0kb upstream 5.0kb upstream 7275 true Chr13: 43020525-43027799 Glycine max
Glyma.13G337200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 43020525-43025524 Glycine max
Glyma.13G337200 5.0kb downstream 5.0kb downstream 7275 true Chr13: 43025525-43032799 Glycine max
Glyma.13G337200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 43027800-43032799 Glycine max
Glyma.13G337200 10.0kb upstream 10.0kb upstream 12275 true Chr13: 43015525-43027799 Glycine max
Glyma.13G337200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 43015525-43025524 Glycine max
Glyma.13G337200 10.0kb downstream 10.0kb downstream 12275 true Chr13: 43025525-43037799 Glycine max
Glyma.13G337200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 43027800-43037799 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122032262 5273 Angiosperm View MSA
122316746 5265 Fabidae View MSA
124037144 5270 Rosid View MSA
123610216 5271 Pentapetalae View MSA
122644847 5272 Eudicot View MSA
121351918 5274 Embryophyte View MSA
123382411 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0389046 0.0 0.15849 Low Low
cufflinks 1.93416 0.0 6.18589   High
cufflinks 0.531807 0.0 1.93067    
cufflinks 0.198532 0.0 0.757071    
cufflinks 0.80013 0.0 2.82705    
cufflinks 0.217034 0.0 0.824824 Low  
cufflinks 0.358891 0.0 1.33318    
cufflinks 0.311045 0.0 1.16196    
cufflinks 0.536323 0.0 1.94665    
cufflinks 1.758        
cufflinks 0.051     Low Low
cufflinks 0.986        
cufflinks 0.524        
cufflinks 0.656        
cufflinks 0.123       Low
cufflinks 0.939        
cufflinks 0.675        
cufflinks 0.941        
cufflinks 4.378       High
cufflinks 0.78        
cufflinks 0.049     Low Low
cufflinks 0.957        
cufflinks 3.626       High
cufflinks 0.05     Low Low
cufflinks 0.95        
cufflinks 0.272        

0 Strain