Gene : Glyma.13G338000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR33102:SF3 - DVL13-RELATED Genomic Order:  3380
Name:  ? Glyma.13G338000 Secondary Identifier:  ? PAC:30501405
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G338000 0.5kb upstream 0.5kb upstream 1275 true Chr13: 43082848-43084122 Glycine max
Glyma.13G338000 0.5kb upstream 0.5kb upstream 500 false Chr13: 43082848-43083347 Glycine max
Glyma.13G338000 0.5kb downstream 0.5kb downstream 1275 true Chr13: 43083348-43084622 Glycine max
Glyma.13G338000 0.5kb downstream 0.5kb downstream 500 false Chr13: 43084123-43084622 Glycine max
Glyma.13G338000 1.0kb upstream 1.0kb upstream 1775 true Chr13: 43082348-43084122 Glycine max
Glyma.13G338000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 43082348-43083347 Glycine max
Glyma.13G338000 1.0kb downstream 1.0kb downstream 1775 true Chr13: 43083348-43085122 Glycine max
Glyma.13G338000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 43084123-43085122 Glycine max
Glyma.13G338000 2.0kb upstream 2.0kb upstream 2775 true Chr13: 43081348-43084122 Glycine max
Glyma.13G338000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 43081348-43083347 Glycine max
Glyma.13G338000 2.0kb downstream 2.0kb downstream 2775 true Chr13: 43083348-43086122 Glycine max
Glyma.13G338000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 43084123-43086122 Glycine max
Glyma.13G338000 5.0kb upstream 5.0kb upstream 5775 true Chr13: 43078348-43084122 Glycine max
Glyma.13G338000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 43078348-43083347 Glycine max
Glyma.13G338000 5.0kb downstream 5.0kb downstream 5775 true Chr13: 43083348-43089122 Glycine max
Glyma.13G338000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 43084123-43089122 Glycine max
Glyma.13G338000 10.0kb upstream 10.0kb upstream 10775 true Chr13: 43073348-43084122 Glycine max
Glyma.13G338000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 43073348-43083347 Glycine max
Glyma.13G338000 10.0kb downstream 10.0kb downstream 10775 true Chr13: 43083348-43094122 Glycine max
Glyma.13G338000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 43084123-43094122 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250218 5265 Fabidae View MSA
124068488 5270 Rosid View MSA
123751653 5271 Pentapetalae View MSA
122795798 5272 Eudicot View MSA
122048565 5273 Angiosperm View MSA
121346075 5274 Embryophyte View MSA
123380321 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.4123 0.0 15.217    
cufflinks 0.252974 0.0 1.01066   Low
cufflinks 0.412137 0.0 1.61774    
cufflinks 6.49305 0.0 21.4389   High
cufflinks 2.20826 0.0 8.03239    
cufflinks 0.32324 0.0 1.2812   Low
cufflinks 0.789634 0.0 3.01658    
cufflinks 4.22841 0.0 14.6341    
cufflinks 0.679        
cufflinks 0.093       Low
cufflinks 0.497        
cufflinks 9.282     High High
cufflinks 12.544     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.97        
cufflinks 0.162       Low
cufflinks 0.92        
cufflinks 1.481        
cufflinks 0.745        
cufflinks 0.213        
cufflinks 0.35        
cufflinks 0.252        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.853        
cufflinks 0.777        

0 Strain